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Polymerization dynamics of single actin filaments is investigated theoretically using a stochastic model that takes into account the hydrolysis of ATP-actin subunits, the geometry of actin filament tips, the lateral interactions between the…

软凝聚态物质 · 物理学 2009-11-11 Evgeny B. Stukalin , Anatoly B. Kolomeisky

Polymerization of dendritic actin networks underlies important mechanical processes in cell biology such as the protrusion of lamellipodia, propulsion of growth cones in dendrites of neurons, intracellular transport of organelles and…

生物物理 · 物理学 2021-03-17 Rohan Abeyaratne , Prashant K. Purohit

The polymerization dynamics of double-stranded polymers, such as actin filaments, is investigated theoretically using simple chemical kinetic models that explicitly take into account some microscopic details of the polymer structure and the…

软凝聚态物质 · 物理学 2009-11-10 Evgeny B. Stukalin , Anatoly B. Kolomeisky

Cellular actin dynamics result from collective action of hundreds of regulatory proteins, majority of which target actin filaments at their barbed ends. Three key actin binding proteins - profilin, cofilin and twinfilin individually…

生物物理 · 物理学 2023-11-14 Ankita , Sandeep Choubey , Shashank Shekhar

We study force generation by a set of parallel actin filaments growing against a non-rigid obstacle, in presence of an external load. The filaments polymerize by either moving the whole obstacle, with a large energy cost, or by causing…

亚细胞过程 · 定量生物学 2016-06-27 Raj Kumar Sadhu , Sakuntala Chatterjee

Actin is a filamentary protein which has many remarkable properties making it an ideal system for the study of the dynamics and mechanics of semi-flexible polymer solutions and gels; actin has a persistence length of over 10 microns and can…

软凝聚态物质 · 物理学 2008-02-03 A. C. Maggs

The polymerization of actin via branching at a cell membrane containing nucleation-promoting factors is simulated using a stochastic-growth methodology. The polymerized-actin distribution displays three types of behavior: a) traveling…

生物物理 · 物理学 2015-05-19 Anders E. Carlsson

The growth of actin filament networks is a fundamental biological process that drives a variety of cellular and intracellular motions. During motility, eukaryotic cells and intracellular pathogens are propelled by actin networks organized…

生物物理 · 物理学 2009-11-13 Joshua W. Shaevitz , Daniel A. Fletcher

Actin is a key component of the cytoskeleton, which plays central roles in cell motility, division, growth, and tensile strength. To enable this wide range of transient mechanical processes and properties, networks of actin filaments…

The actin cytoskeleton is a key component in the machinery of eukaryotic cells, and it selfassembles out of equilibrium into a wide variety of biologically crucial structures. While the molecular mechanisms involved are well characterized,…

软凝聚态物质 · 物理学 2017-01-04 Giulia Foffano , Nicolas Levernier , Martin Lenz

Filopodia are ubiquitous fingerlike protrusions, spawned by many eukaryotic cells, to probe and interact with their environments. Polymerization dynamics of actin filaments, comprising the structural core of filopodia, largely determine…

亚细胞过程 · 定量生物学 2016-05-11 Ulrich Dobramysl , Garegin A. Papoian , Radek Erban

Actin filaments are critical components of the eukaryotic cytoskeleton, playing important roles in a number of cellular functions, such as cell migration, organelle transport, and mechanosensation. They are helical polymers with a…

亚细胞过程 · 定量生物学 2018-01-17 Carlos S. Floyd , Christopher Jarzynski , Garegin A. Papoian

A motile cell, when stimulated, shows a dramatic increase in the activity of its membrane, manifested by the appearance of dynamic membrane structures such as lamellipodia, filopodia and membrane ruffles. The external stimulus turns on…

软凝聚态物质 · 物理学 2009-11-11 Nir Gov , Ajay Gopinathan

The mechanical properties of polymer gels based on cytoskeleton proteins (e.g. actin) have been studied extensively due to their significant role in biological cell motility and in maintaining the cell's structural integrity. Microrheology…

软凝聚态物质 · 物理学 2014-08-22 Adar Sonn-Segev , Anne Bernheim-Groswasser , Yael Roichman

Actin is one of the most studied cytoskeleton proteins showing a very rich span of structures. It can self-assemble actively into dynamical structures that govern the mechanical properties of the cell, its motility and its division.…

软凝聚态物质 · 物理学 2020-03-17 Maayan Levin , Raya Sorkin , David Pine , Rony Granek , Anne Bernheim-Groswasser , Yael Roichman

Based on experimental observations it is known that various biological cells exhibit a persistent random walk during migration on flat substrates. The persistent random walk is characterized by `stop-and-go' movements : unidirectional…

亚细胞过程 · 定量生物学 2009-11-11 B. Nandy , A. Baumgaertner

The dynamic behavior of bundles of actin filaments growing against a loaded obstacle is investigated through a generalized version of the standard multi filaments Brownian Ratchet model in which the (de)polymerizing filaments are treated…

生物物理 · 物理学 2019-05-22 Alessia Perilli , Carlo Pierleoni , Jean-Paul Ryckaert

We study the stochastic dynamics of growth and shrinkage of single actin filaments or microtubules taking into account insertion, removal, and ATP/GTP hydrolysis of subunits. The resulting phase diagram contains three different phases: a…

软凝聚态物质 · 物理学 2011-03-04 Padinhateeri Ranjith , David Lacoste , Kirone Mallick , Jean-Francois Joanny

Eukaryotic cells and intracellular pathogens such as bacteria or viruses utilize the actin polymerization machinery to propel themselves forward. Thereby, the onset of motion and choice of direction may be the result of a spontaneous…

软凝聚态物质 · 物理学 2009-09-04 Karin John , Denis Caillerie , Philippe Peyla , Mourad Ismail , Annie Raoult , Jacques Prost

We study the stochastic dynamics of growth and shrinkage of single actin filaments taking into account insertion, removal, and ATP hydrolysis of subunits either according to the vectorial mechanism or to the random mechanism. In a previous…

生物大分子 · 定量生物学 2015-05-13 Padinhateeri Ranjith , Kirone Mallick , Jean-Francois Joanny , David Lacoste
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