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We investigated isolated sodium/chloride aqueous droplets at the microscopic level, which comprise from about 5k to 1M water molecules and whose salt concentrations are 0.2$m$ (brackish water) and 0.6$m$ (sea water), by means of molecular…

化学物理 · 物理学 2022-06-02 Valérie Vallet , Jonathan Coles , Florent Réal , Céline Houriez , Michel Masella

In this study, molecular dynamic simulations are employed to investigate the nucleation of NaCl crystal in solutions. According to the simulations, the dissolved behaviors of NaCl in water are dependent on ion concentrations. With…

化学物理 · 物理学 2018-11-29 Qiang Sun

We give an explicit formula for the membrane potential of cells in terms of the intracellular and extracellular ionic concentrations, and derive equations for the ionic currents that flow through channels, exchangers and electrogenic pumps…

生物物理 · 物理学 2007-05-23 Lars Petter Endresen , Kevin Hall

A model of a finite cylindrical ion channel through a phospholipid membrane of width $L$ separating two electrolyte reservoirs is studied. Analytical solution of the Poisson equation is obtained for an arbitrary distribution of ions inside…

软凝聚态物质 · 物理学 2009-11-11 Yan Levin

Significant temperature effects on the electrokinetic transport in a nanochannel with a slab geometry are demonstrated using a molecular dynamics (MD) model. A system consisting of Na+ and Cl- ions dissolved in water and confined between…

软凝聚态物质 · 物理学 2010-07-01 B. Jelinek , S. D. Felicelli , P. F. Mlakar , J. F. Peters

Ions in channels have been imagined as hard balls in a macroscopic mechanical model, for a very long time. Hard balls interact by collisions in such models, randomly knocking each other on and off `binding' sites in thermal motion. But ions…

生物大分子 · 定量生物学 2020-05-15 Robert S Eisenberg

A simple analytical model of a layered system comprised of a single passage of a serpentine flow channel and a parallel underlying porous electrode (or porous layer) is proposed. This analytical model is derived from Navier-Stokes motion in…

流体动力学 · 物理学 2016-10-20 Xinyou Ke , J. Iwan D. Alexander , Joseph M. Prahl , Robert F. Savinell

Transport properties of concentrated electrolytes have been analyzed using classical molecular dynamics simulations with the algorithms and parameters typical of simulations describing complex electrokinetic phenomena. The electrical…

材料科学 · 物理学 2015-03-17 Carles Calero , Jordi Faraudo , Marcel Aguilella-Arzo

Nanopores in solid state membranes are a tool able to probe nanofluidic phenomena or can act as a single molecular sensor. They also have diverse applications in filtration, desalination or osmotic power generation. Many of these…

We study the response of a spherical colloid under alternating electric fields (AC-fields) by mesoscopic simulation method, accounting in full for hydrodynamic and electrostatic interactions. We focus on a special case of uncharged…

软凝聚态物质 · 物理学 2013-04-17 Jiajia Zhou , Friederike Schmid

A simple theory of ion permeation through a channel is presented, in which diffusion occurs according to Fick's law and drift according to Ohm's law, in the electric field determined by all the charges present. This theory accounts for…

生物大分子 · 定量生物学 2016-10-17 Bob Eisenberg

Periodic supercell models of electric double layers formed at the interface between a charged surface and an electrolyte are subject to serious finite size errors and require certain adjustments in the treatment of the long-range…

化学物理 · 物理学 2024-07-10 Thomas Sayer , Chao Zhang , Michiel Sprik

In this tutorial we discuss the chemical potential of ions in water (i.e., in a salt solution, in an electrolyte phase) and inside (charged) nanoporous materials such as porous membranes. In water treatment, such membranes are often used to…

化学物理 · 物理学 2025-06-25 P. M. Biesheuvel

We present an explicit water molecular dynamics simulation of dilute solutions of model alkyltrimethylammonium surfactant ions (number of methylene groups in the tail is 3, 5, 8, 10, and 12) in mixture with NaF, NaCl, NaBr, and NaI salts,…

软凝聚态物质 · 物理学 2013-12-17 M. Druchok , Č. Podlipnik , V. Vlachy

We consider a class of systems where, due to the large mismatch of dielectric constants, the Coulomb interaction is approximately one-dimensional. Examples include ion channels in lipid membranes and water filled nanopores in silicon or…

统计力学 · 物理学 2015-06-25 A. Kamenev , J. Zhang , A. I. Larkin , B. I. Shklovskii

We introduce an implicit solvent Molecular Dynamics approach for calculating ionic fluxes through narrow nano-pores and transmembrane channels. The method relies on a dual-control- volume grand-canonical molecular dynamics (DCV-GCMD)…

软凝聚态物质 · 物理学 2012-03-13 José Rafael Bordin , Alexandre Diehl , Marcia C. Barbosa , Yan Levin

Specifically, we examine concentrations from [NaCl]=1m to [NaCl]=6m, where 6.1m represents the solubility threshold of NaCl in H2O. For the water model, we employ the flexible TIP4P/$\epsilon_{Flex}$ model, which offers an enhanced…

统计力学 · 物理学 2024-10-25 Raúl Fuentes-Azcatl

The main goal of this work is to examine the qualitative effect of ion sizes via a steady-state boundary value problem. We study a one-dimensional version of a Poisson-Nernst-Planck system with a local hard-sphere potential model for ionic…

数学物理 · 物理学 2022-03-18 Weishi Liu , Hamid Mofidi

In this article we address the three-dimensional modeling and simulation of biological ion channels using a continuum-based approach. Our multi-physics formulation self-consistently combines, to the best of our knowledge for the first time,…

数值分析 · 数学 2015-09-25 Riccardo Sacco , Paolo Airoldi , Aurelio G. Mauri , Joseph W. Jerome

Ion transport through charged nanopores is commonly interpreted in terms of electrical double layer structure, leading to the expectation of cation-selective conduction in negatively charged pores. This picture can break down for…

统计力学 · 物理学 2026-04-29 Salman Shabbir , Dezső Boda , Zoltán Ható