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We study the mechanical properties of semiflexible polymers when the contour length of the polymer is comparable to its persistence length. We compute the exact average end-to-end distance and shape of the polymer for different boundary…

生物大分子 · 定量生物学 2013-05-29 Yuko Hori , Ashok Prasad , Jane' Kondev

Cell dynamics simulation is used to investigate the phase behavior of block copolymer/homopolymer mixture subjected to a steady shear flow. Phase transitions occur from transverse to parallel and then to perpendicular lamellar structure…

软凝聚态物质 · 物理学 2015-06-29 Y. Guo , J. Zhang , B. Wang , H. Wu , M. Sun , J. Pan

The properties of semidilute polymer solutions are investigated at equilibrium and under shear flow by mesoscale simulations, which combine molecular dynamics simulations and the multiparticle collision dynamics approach. In semidilute…

软凝聚态物质 · 物理学 2015-03-19 Chien-Cheng Huang , Roland G. Winkler , Godehard Sutmann , Gerhard Gompper

We propose a theory of the dynamics of polymers in dilute solution, in which the popular Zimm and Rouse models are limiting cases of infinitely large and small draining parameter. The equation of motion for the polymer segments beads) is…

软凝聚态物质 · 物理学 2007-05-23 V. Lisy , J. Tothova , A. V. Zatovsky

We study the model of a partially directed flexible or semi-flexible homopolymer on a square lattice, subject to an externally applied force, in a direction either parallel to, or perpendicular to the preferred direction. The polymer is…

统计力学 · 物理学 2015-05-19 Pui-Man Lam , Yi Zhen

We investigate the translocation dynamics of a folded linear polymer which is pulled through a nanopore by an external force. To this end, we generalize the iso-flux tension propagation (IFTP) theory for end-pulled polymer translocation to…

软凝聚态物质 · 物理学 2019-12-18 Bappa Ghosh , Jalal Sarabadani , Srabanti Chaudhury , Tapio Ala-Nissila

The translocation of a polymer through a pore in a membrane separating fluids of different viscosities is studied via several computational approaches. Starting with the polymer halfway, we find that as a viscosity difference across the…

软凝聚态物质 · 物理学 2013-04-17 Hendrick W. de Haan , Gary W. Slater

The nonequilibrium structural and dynamical properties of semiflexible active polar polymers subject to linear flow are studied by numerical simulations. Filaments are confined in two dimensions and immersed in a fluid described by the…

软凝聚态物质 · 物理学 2026-04-23 A. Lamura , R. G. Winkler

The non-equilibrium structural and dynamical properties of a flexible polymer tethered to a reflecting wall and subject to oscillatory linear flow are studied by numerical simulations. Polymer is confined in two dimensions and is modeled as…

软凝聚态物质 · 物理学 2024-07-30 A. Lamura

We discuss various aspects of the randomly interacting directed polymers with emphasis on the phases and phase transition. We also discuss the behaviour of overlaps of directed paths in a random medium.

凝聚态物理 · 物理学 2015-06-25 Somendra M. Bhattacharjee , Sutapa Mukherji

This study focuses on comparing the individual polymer chain dynamics in an entangled polymeric liquid under different shear and extension rates. Polymer chains under various shear rates and extension rates were simulated using a…

化学物理 · 物理学 2021-01-15 Behrouz Behdani , Tong Mou , Cody Spratt , Slava Butcovich , Ryan Gettler , Joontaek Park

In this paper we consider in detail the connection between the problem of a polymer in a random medium and that of a quantum particle in a random potential. We are interested in a system of finite volume where the polymer is known to be…

无序系统与神经网络 · 物理学 2009-10-31 Yohannes Shiferaw , Yadin Y. Goldschmidt

The unfolding of a polymer below the $\theta$ point when pulled by an external force is studied both in d=2 on the lattice and in $d=3$ off lattice. A ground state analysis of finite length chains shows that the globule unfolds via multiple…

统计力学 · 物理学 2009-11-07 D. Marenduzzo , A. Maritan , A. Rosa , F. Seno

We investigate the non-equilibrium dynamics of an isolated polymer in a stationary elongational flow. We compute the relaxation time to the steady-state configuration as a function of the Weissenberg number. A strong increase of the…

可精确求解与可积系统 · 物理学 2007-05-23 D. Vincenzi , E. Bodenschatz

Using Brownian Dynamics, we study the dynamical behavior of a polymer grafted onto an adhesive surface close to the mechanically induced adsorption-stretching transition. Even though the transition is first order, (in the infinite chain…

The tumbling dynamics of individual polymers in semidilute solution is studied by large-scale non-equilibrium mesoscale hydrodynamic simulations. We find that the tumbling time is equal to the non-equilibrium relaxation time of the polymer…

软凝聚态物质 · 物理学 2011-03-21 C. -C. Huang , G. Sutmann , G. Gompper , R. G. Winkler

The randomization effect of the two-way (particle-flow) interaction has been studied and quantified using the notion of distributed chaos and the results of numerical simulations and laboratory measurements. It is shown, in particular, that…

流体动力学 · 物理学 2023-09-07 A. Bershadskii

The mechanical stretching of single poly-proteins is an emerging tool for the study of protein (un)folding, chemical catalysis and polymer physics at the single molecule level. The observed processes i.e unfolding or reduction events, are…

生物大分子 · 定量生物学 2014-07-17 Rodolfo I. Hermans

We present a tube model for the Brownian dynamics of associating polymers in extensional flow. In linear response, the model confirms the analytical predictions for the sticky diffusivity by Leibler- Rubinstein-Colby theory. Although a…

软凝聚态物质 · 物理学 2021-02-10 Charley Schaefer , Tom C. B. McLeish

Polycrystals are partially ordered solids where crystalline order extends over mesoscopic length scales, namely, the grain size. We study the Poisuielle flow of such materials in a rough channel. In general, similar to yield stress fluids,…

软凝聚态物质 · 物理学 2020-04-22 Tanmoy Sarkar , Pinaki Chaudhuri , Anirban Sain