相关论文: On the Stability of Knots in Excitable Media

We study the dynamics of knotted vortices in a bulk excitable medium using the FitzHugh-Nagumo model. From a systematic survey of all knots of at most eight crossings we establish that the generic behaviour is of unsteady, irregular…

The FitzHugh-Nagumo equation provides a simple mathematical model of cardiac tissue as an excitable medium hosting spiral wave vortices. Here we present extensive numerical simulations studying long-term dynamics of knotted vortex string…

Vortex stretching is a common feature of many complex flows, including turbulence. Experiments and simulations of isolated vortex knots demonstrate that this behavior can also be seen in relatively simple systems, and appears to be…

The existence of stable links and knots is demonstrated in three-dimensional, bistable, chemical media. The reaction-diffusion medium segregates into regions of high and low concentration separated by sharp interfaces. The interfaces repel…

Rotating spiral and scroll waves (vortices) are investigated in the FitzHugh-Nagumo model of excitable media. The focus is on a parameter region in which there exists bistability between alternative stable vortices with distinct periods.…

In this paper we present the results of parallel numerical computations of the long-term dynamics of linked vortex filaments in a three-dimensional FitzHugh-Nagumo excitable medium. In particular, we study all torus links with no more than…

The idea that the knottedness (hydrodynamic Helicity) of a fluid flow is conserved has a long history in fluid mechanics. The quintessential example of a knotted flow is a knotted vortex filament, however, owing to experimental…

In this paper, the Kelvin wave and knot dynamics are studied on three dimensional smoothly deformed entangled vortex-membranes in five dimensional space. Owing to the existence of local Lorentz invariance and diffeomorphism invariance, in…

We present a method for numerically building a vortex knot state in the superfluid wave-function of a Bose-Einstein condensate. We integrate in time the governing Gross-Pitaevskii equation to determine evolution and stability of the two…

We use computer simulations to compare the dynamical behaviour of torus and even-twist knots in polymers under tension. The knots diffuse through a mechanism similar to reptation. Their friction coefficients grow linearly with average knot…

We consider evolution of initial disturbances in spatially extended systems with autonomous rhythmic activity, such as the heart. We consider the case when the activity is stable with respect to very smooth (changing little across the…

We report how strategic evolution can stabilize topological states in a network of FitzHugh-Nagumo systems. The evolution follows a repeated process of adding or deleting of links between two nodes that is decided based on a threshold set…

Knotted proteins embed a physical (i.e., open) knot within their native structures. For decades, significant effort has been devoted to elucidating the functional role of knots in proteins, yet no consensus has been reached. Here, using…

We use numerical simulations of a bead-spring model chain to investigate the evolution of the conformation of long and flexible elastic fibers in a steady shear flow. In particular, for rather open initial configurations, and by varying a…

Vortex lattices -- highly ordered arrays of vortices -- are known to arise in quantum systems such as type II superconductors and Bose-Einstein condensates. More recently, similar arrangements have been reported in classical rotating…

Semiflexible polymers are widely used as a paradigm for understanding structural phases in biomolecules including folding of proteins. Here, we compare bead-spring and bead-stick variants of coarse-grained semiflexible polymer models that…

Streamlines, vortex lines and magnetic flux tubes in turbulent fluids and plasmas display a great amount of coiling, twisting and linking, raising the question as to whether their topological complexity (continually created and destroyed by…

We study vortex knotting in the Faddeev-Skyrme model. Starting with a straight vortex line twisted around its axis we follow its evolution under dissipative energy minimization dynamics. With low twist per unit length the vortex forms a…

The three-dimensional (3D) Fitzhugh-Nagumo neuron model with inertia was shown to exhibit a chaotic mixed-mode dynamics composed of large-amplitude spikes separated by an irregular number of small-amplitude chaotic oscillations. In contrast…

Tangles of string typically become knotted, from macroscopic twine down to long-chain macromolecules such as DNA. Here we demonstrate that knotting also occurs in quantum wavefunctions, where the tangled filaments are vortices (nodal…