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Existing studies comparing individual-based models of growing cell populations and their continuum counterparts have mainly focused on homogeneous populations, in which all cells have the same phenotypic characteristics. However,…

种群与进化 · 定量生物学 2022-06-06 Fiona R Macfarlane , Xinran Ruan , Tommaso Lorenzi

The central goal of a dynamical theory of evolution is to abstract the mean evolutionary trajectory in the trait space by considering ecological processes at the level of the individual. In this work, we develop such a theory for a new…

种群与进化 · 定量生物学 2020-03-25 Vaibhav Madhok

How coperation between self-interested individuals evolve is a crucial problem, both in biology and in social sciences, that is far from being well understood. Evolutionary game theory is a useful approach to this issue. The simplest model…

元胞自动机与格子气 · 物理学 2007-12-21 H. Fort

Models relating to the Species-Area curve are usually defined at the species level, and concerned only with ecological timescales. We examine an individual-based model of co-evolution on a spatial lattice based on the Tangled Nature model,…

种群与进化 · 定量生物学 2007-05-23 Daniel Lawson , Henrik Jeldtoft Jensen

We consider a moving boundary mathematical model of biological invasion. The model describes the spatiotemporal evolution of two adjacent populations: each population undergoes linear diffusion and logistic growth, and the boundary between…

种群与进化 · 定量生物学 2023-09-06 Matthew J Simpson , Nizhum Rahman , Scott W McCue , Alexander KY Tam

We study an individual-based model in which two spatially-distributed species, characterized by different diffusivities, compete for resources. We consider three different ecological settings. In the first, diffusing faster has a cost in…

种群与进化 · 定量生物学 2016-01-27 Simone Pigolotti , Roberto Benzi

Biological evolution is realised through the same mechanisms of birth and death that underlie change in population density. The deep interdependence between ecology and evolution is well-established, and recent models focus on integrating…

种群与进化 · 定量生物学 2025-10-14 A. Bradley Duthie , Victor J. Luque

In order to understand how nonlocal diffusion and pulse intervention affect dynamics of species, we focus on an age-structured nonlocal diffusion model in moving and heterogeneous environment, where nonlocal diffusion describes the long…

偏微分方程分析 · 数学 2024-07-16 Haiyan Xu , Carlos Alberto Santos , Mengyun Zhang , Zhigui Lin

We describe a continuous-time modelling framework for biological population dynamics that accounts for demographic noise. In the spirit of the methodology used by statistical physicists, transitions between the states of the system are…

种群与进化 · 定量生物学 2018-07-19 George W. A. Constable , Alan J. McKane

For most organisms with viscous population structure, spatially localized growth drives the invasive advance of a favorable mutation. We model a two-allele competition where recurrent mutation introduces a genotype with a rate of local…

种群与进化 · 定量生物学 2007-05-23 Lauren O'Malley , James Basham , Joseph A. Yasi , G. Korniss , Andrew Allstadt , Tom Caraco

Numerous problems in development, regeneration, and disease involve simultaneous evolution of both spatial organization and the internal state of the constituents in addition to local interactions and crowding. This motivates us to study a…

软凝聚态物质 · 物理学 2026-04-09 Yagyik Goswami

Population structure can have a significant effect on evolution. For some systems with sufficient symmetry, analytic results can be derived within the mathematical framework of evolutionary graph theory which relate to the outcome of the…

种群与进化 · 定量生物学 2019-03-11 Christopher E. Overton , Mark Broom , Christoforos Hadjichrysanthou , Kieran J. Sharkey

We live in a time where climate models predict future increases in environmental variability and biological invasions are becoming increasingly frequent. A key to developing effective responses to biological invasions in increasingly…

种群与进化 · 定量生物学 2015-12-16 Sebastian J. Schreiber , Maureen E. Ryan

Throughout developmental biology and ecology, transport can be driven by nonlocal interactions. Examples include cells that migrate based on contact with pseudopodia extended from other cells, and animals that move based on their vision of…

斑图形成与孤子 · 物理学 2023-07-07 Thomas Jun Jewell , Andrew L. Krause , Philip K. Maini , Eamonn A. Gaffney

We study the stochastic evolution of four species in cyclic competition in a well mixed environment. In systems composed of a finite number $N$ of particles these simple interaction rules result in a rich variety of extinction scenarios,…

统计力学 · 物理学 2012-07-09 C. H. Durney , S. O. Case , M. Pleimling , R. K. P. Zia

The sampling of interaction partners depends on often implicit modelling assumptions, yet has marked effects on the dynamics in evolutionary games. One particularly important aspect is whether or not competitors also interact. Population…

种群与进化 · 定量生物学 2018-11-20 Christoph Hauert , Jacek Miȩkisz

The question of whether biological populations survive or are eventually driven to extinction has long been examined using mathematical models. In this work we study population survival or extinction using a stochastic, discrete…

种群与进化 · 定量生物学 2021-09-15 Yifei Li , Stuart T. Johnston , Pascal R. Buenzli , Peter van Heijster , Matthew J. Simpson

We study the limit of many small mutations of a model of population dynamics. The population is structured by phonological traits and is spatially inhomogeneous. The various sub-populations compete for the same nutrient which diffuses…

偏微分方程分析 · 数学 2016-01-19 Pierre-Emmanuel Jabin , Raymond Strother Schram

Human mobility is a key factor in spatial disease dynamics and related phenomena. In computational models host mobility is typically modelled by diffusion in space or on metapolulation networks. Alternatively, an effective force of…

物理与社会 · 物理学 2012-03-07 Vitaly Belik , Theo Geisel , Dirk Brockmann

Agent-based stochastic models for finite populations have recently received much attention in the game theory of evolutionary dynamics. Both the ultimate fixation and the pre-fixation transient behavior are important to a full understanding…

种群与进化 · 定量生物学 2015-03-17 Da Zhou , Hong Qian