相关论文: Parallel netCDF: A Scientific High-Performance I/O…

In this work, a new parallel dual-grid multiscale approach for CFD-DEM couplings is investigated. Dual- grid multiscale CFD-DEM couplings have been recently developed and successfully adopted in different applications still, an efficient…

The performance of biomolecular molecular dynamics simulations has steadily increased on modern high performance computing resources but acceleration of the analysis of the output trajectories has lagged behind so that analyzing simulations…

Upcoming HPC clusters will feature hybrid memories and storage devices per compute node. In this work, we propose to use the MPI one-sided communication model and MPI windows as unique interface for programming memory and storage. We…

C is the lingua franca of programming and almost any device can be programmed using C. However, programming mod-ern heterogeneous architectures such as multi-core CPUs and GPUs requires explicitly expressing parallelism as well as…

Scientific applications in HPC environment are more com-plex and more data-intensive nowadays. Scientists usually rely on workflow system to manage the complexity: simply define multiple processing steps into a single script and let the…

Message Passing Interface (MPI) plays a crucial role in distributed memory parallelization across multiple nodes. However, parallelizing MPI code manually, and specifically, performing domain decomposition, is a challenging, error-prone…

Nonequispaced discrete Fourier transformation (NDFT) is widely applied in all aspects of computational science and engineering. The computational efficiency and accuracy of NDFT has always been a critical issue in hindering its…

The ubiquity of accelerators in high-performance computing has driven programming complexity beyond the skill-set of the average domain scientist. To maintain performance portability in the future, it is imperative to decouple…

Heterogeneous clusters with nodes containing one or more accelerators, such as GPUs, have become common. While MPI provides inter-address space communication, and OpenCL provides a process with access to heterogeneous computational…

In this work, we investigate a multi-source multi-cast network with the aid of an arbitrary number of relays, where it is assumed that no direct link is available at each S-D pair. The aim is to find the fundamental limit on the maximal…

In this paper, we present a novel and new file-based communication architecture using the local filesystem for large scale parallelization. This new approach eliminates the issues with filesystem overload and resource contention when using…

Shared memory multiprocessors come back to popularity thanks to rapid spreading of commodity multi-core architectures. As ever, shared memory programs are fairly easy to write and quite hard to optimise; providing multi-core programmers…

With the ever proliferating size and scale of the WWW [1] efficient ways of exploring content are of increasing importance. How can we efficiently retrieve information from it through crawling? And in this era of tera and multi-core…

As the High Performance Computing world moves towards the Exa-Scale era, huge amounts of data should be analyzed, manipulated and stored. In the traditional storage/memory hierarchy, each compute node retains its data objects in its local…

Hybrid MPI+threads programming is gaining prominence, but, in practice, applications perform slower with it compared to the MPI everywhere model. The most critical challenge to the parallel efficiency of MPI+threads applications is slow…

Parallel computing is a standard approach to achieving high-performance computing (HPC). Three commonly used methods to implement parallel computing include: 1) applying multithreading technology on single-core or multi-core CPUs; 2)…

CDFCI is a shared-memory parallel numerical program for computing low-lying eigenpairs of large-scale, non-relativistic fermionic Hamiltonians. The software is designed to handle a broad class of many-body quantum models, including both ab…

One of the most demanding challenges for the designers of parallel computing architectures is to deliver an efficient network infrastructure providing low latency, high bandwidth communications while preserving scalability. Besides off-chip…

Message Passing Interface (MPI) is a foundational programming model for high-performance computing. MPI libraries traditionally employ network interconnects (e.g., Ethernet and InfiniBand) and network protocols (e.g., TCP and RoCE) with…

With the approach of Exascale computing power for large-scale High Performance Computing (HPC) clusters, the gap between compute capabilities and storage systems is growing larger. This is particularly problematic for the Weather Research…