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Recent methods have been developed to map single-cell lineage statistics to population growth. Because population growth selects for exponentially rare phenotypes, these methods inherently depend on sampling large deviations from finite…

统计力学 · 物理学 2025-01-16 Trevor GrandPre , Ethan Levien , Ariel Amir

Effort has been given for the development of an analytical approach that helps to address several sigmoidal and non-sigmoidal growth processes found in literature. In the proposed approach, the role of specific growth rate in different…

物理与社会 · 物理学 2016-10-21 Dibyendu Biswas , Swarup Poria , Sankar Nayaran Patra

The quintessential property of neuronal systems is their intensive patterns of selective synaptic connections. The current work describes a physics-based approach to neuronal shape modeling and synthesis and its consideration for the…

神经元与认知 · 定量生物学 2009-11-10 Luciano da Fontoura Costa , Regina Celia Coelho

This paper provides time-dependent expressions for the expected degree distribution of a given network that is subject to growth, as a function of time. We consider both uniform attachment, where incoming nodes form links to existing nodes…

统计力学 · 物理学 2013-12-16 Babak Fotouhi , Michael G. Rabbat

We consider the problem of learning the functions computing children from parents in a Structural Causal Model once the underlying causal graph has been identified. This is in some sense the second step after causal discovery. Taking a…

机器学习 · 统计学 2017-07-03 Paul K. Rubenstein , Ilya Tolstikhin , Philipp Hennig , Bernhard Schoelkopf

High-throughput experimental techniques and bioinformatics tools make it possible to obtain reconstructions of the metabolism of microbial species. Combined with mathematical frameworks such as flux balance analysis, which assumes that…

We consider in-network computation of an arbitrary function over an arbitrary communication network. A network with capacity constraints on the links is given. Some nodes in the network generate data, e.g., like sensor nodes in a sensor…

网络与互联网体系结构 · 计算机科学 2010-10-01 Virag Shah , Bikash Kumar Dey , D. Manjunath

We give a general strategy to construct superoscillating/growing functions using an orthogonal polynomial expansion of a bandlimited function. The degree of superoscillation/growth is controlled by an anomalous expectation value of a…

数学物理 · 物理学 2023-11-08 Tathagata Karmakar , Andrew N. Jordan

We propose general conditions for the emergence of Turing patterns in a domain that changes size through homogeneous growth/shrinkage based on the qualitative changes of a potential function. For this part of the work, we consider the most…

斑图形成与孤子 · 物理学 2023-10-03 Aldo Ledesma-Durán

The results of training a neural network are heavily dependent on the architecture chosen; and even a modification of only its size, however small, typically involves restarting the training process. In contrast to this, we begin training…

机器学习 · 计算机科学 2024-02-12 Rupert Mitchell , Robin Menzenbach , Kristian Kersting , Martin Mundt

We give examples of data-generating models under which Breiman's random forest may be extremely slow to converge to the optimal predictor or even fail to be consistent. The evidence provided for these properties is based on mostly intuitive…

机器学习 · 统计学 2021-12-01 José A. Ferreira

Boolean networks are special types of finite state time-discrete dynamical systems. A Boolean network can be described by a function from an n-dimensional vector space over the field of two elements to itself. A fundamental problem in…

定量方法 · 定量生物学 2013-07-03 Yi Ming Zou

Random matrix products arise in many science and engineering problems. An efficient evaluation of its growth rate is of great interest to researchers in diverse fields. In the current paper, we reformulate this problem with a generating…

统计力学 · 物理学 2019-11-04 Naranmandula Bao , Junbiao Lu , Yueheng Lan

Finding balanced, highly nonlinear Boolean functions is a difficult problem where it is not known what nonlinearity values are possible to be reached in general. At the same time, evolutionary computation is successfully used to evolve…

神经与进化计算 · 计算机科学 2022-02-18 Claude Carlet , Marko Djurasevic , Domagoj Jakobovic , Luca Mariot , Stjepan Picek

Using a perturbative expansion for weak synaptic weights and weak sources of randomness, we calculate the correlation structure of neural networks with generic connectivity matrices. In detail, the perturbative parameters are the mean and…

神经元与认知 · 定量生物学 2013-07-11 D. Fasoli , O. Faugeras

We introduce a model of a randomly growing interface in multidimensional Euclidean space. The growth model incorporates a random order model as an ingredient of its graphical construction, in a way that replicates the connection between the…

概率论 · 数学 2007-09-12 Timo Seppäläinen

We consider the problem of finding optimal strategies that maximize the average growth-rate of multiplicative stochastic processes. For a geometric Brownian motion the problem is solved through the so-called Kelly criterion, according to…

投资组合管理 · 定量金融 2016-08-31 Francesco Caravelli , Lorenzo Sindoni , Fabio Caccioli , Cozmin Ududec

This paper studies the mathematical properties of collectively canalizing Boolean functions, a class of functions that has arisen from applications in systems biology. Boolean networks are an increasingly popular modeling framework for…

离散数学 · 计算机科学 2023-06-07 Claus Kadelka , Benjamin Keilty , Reinhard Laubenbacher

We introduce and solve a model which considers two coupled networks growing simultaneously. The dynamics of the networks is governed by the new arrival of network elements (nodes) making preferential attachments to pre-existing nodes in…

统计力学 · 物理学 2007-05-23 Dafang Zheng , Guler Ergun

One can often make inferences about a growing network from its current state alone. For example, it is generally possible to determine how a network changed over time or pick among plausible mechanisms explaining its growth. In practice,…

社会与信息网络 · 计算机科学 2021-01-27 George T. Cantwell , Guillaume St-Onge , Jean-Gabriel Young