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相关论文: A Simple Computer Model for Liquid Lipid Bilayers

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We discuss the role coarse-grained models play in the investigation of the structure and thermodynamics of bilayer membranes, and we place them in the context of alternative approaches. Because they reduce the degrees of freedom and employ…

软凝聚态物质 · 物理学 2009-11-11 Marcus Mueller , Kirill Katsov , Michael Schick

We study phase behaviours of lipid--bilayer vesicles functionalised by ligand--receptor complexes made of synthetic DNA by introducing a modelling framework and a dedicated experimental platform. In particular, we perform Monte Carlo…

软凝聚态物质 · 物理学 2016-08-23 S. J. Bachmann , J. Kotar , L. Parolini , A. Šarić , P. Cicuta , L. Di Michele , B. M. Mognetti

We report a numerical simulation of the phase diagram of a simple model for membrane proteins constrained to move in a plane. In analogy with the corresponding three dimensional models, the liquid-gas transition becomes metastable as the…

软凝聚态物质 · 物理学 2009-10-31 Massimo G. Noro , Daan Frenkel

Understanding the (de)mixing behavior of multicomponent lipid bilayers is an important step towards unraveling the nature of spatial composition heterogeneities in cellular membranes and their role in biological function. We use…

软凝聚态物质 · 物理学 2018-05-17 Shushan He , Lutz Maibaum

In this work, we present a mathematical and computational framework to model the dynamics of open lipid bilayer membranes interacting with ambient Stokes flow. The model explicitly couples the three-dimensional viscous fluid, the…

数值分析 · 数学 2026-01-21 Han Zhou , Yuan-Nan Young , Yoichiro Mori

Particle-stabilised emulsions are a cornerstone of soft matter science due to their broad application and fundamental relevance. Computer simulations provide key insights into the formation and behaviour of these emulsions, yet current…

软凝聚态物质 · 物理学 2026-02-19 Elisabeth C. Eij , Joost de Graaf , Martin F. Haase , Jesse M. Steenhoff

Cells offer numerous inspiring examples where proteins and membranes combine to form complex structures that are key to intracellular compartmentalization, cargo transport, and specialization of cell morphology. Despite this wealth of…

We develop a simple coarse-grained bead-spring polymer model exhibiting competing crystallization and glass transitions. For quench rates slower than the critical nucleation rate $|\dot{T}|_{crit}$, systems exhibit a first-order…

软凝聚态物质 · 物理学 2013-03-25 Robert S. Hoy , Nikos Ch. Karayiannis

Cells are defined by lipid membranes that differ in their structure across the tree of life. While the membranes of most bacteria and eukaryotes consist of single-headed bilayer lipids, the membranes of archaea are composed of mixtures of…

软凝聚态物质 · 物理学 2026-04-21 Felix Frey , Miguel Amaral , Anđela Šarić

It is found experimentally that the coexistence region of a vapor-liquid system or a binary mixture is substantially narrowed when the fluid is confined in a aerogel with a high degree of porosity (e.g. of the order of 95% to 99%). A…

统计力学 · 物理学 2007-05-23 Rafael Salazar , Raul Toral , Amitabha Chakrabarti

Ever since the raft model for biomembranes has been proposed, the traditional view of biomembranes based on the fluid-mosaic model has been altered. In the raft model, dynamical heterogeneities in multi-component lipid bilayers play an…

软凝聚态物质 · 物理学 2014-10-16 Shigeyuki Komura , David Andelman

We present a confocal-microscopy study of demixing and remixing in binary liquids containing colloidal particles. First, particle-stabilized emulsions have been fabricated by nucleation and growth of droplets upon cooling from the…

软凝聚态物质 · 物理学 2015-03-19 Job H. J. Thijssen , Paul S. Clegg

Membrane budding has been extensively studied as an equilibrium process attributed to the formation of coexisting domains or changes in the vesicle area to volume ratio (reduced volume). In contrast, non-equilibrium budding remains…

生物物理 · 物理学 2013-03-27 Thomas Franke , Christian T. Leirer , Achim Wixforth , Nily Dan , Matthias F. Schneider

The organization of lipids in biological membranes is essential for cellular functions such as signal transduction and membrane trafficking. A major challenge is how to control lateral lipid composition in supported membranes which are…

软凝聚态物质 · 物理学 2016-08-31 Qing Liang , Yu-qiang Ma

Simulations show that sliding bilayers of colloidal particles can exhibit a new phase, the ``melt-freeze'' phase, where the layers stochastically alternate between solidlike and liquidlike states. We introduce a mean field phenomenological…

软凝聚态物质 · 物理学 2009-11-11 Trieu Mai

The Gaussian (saddle splay) rigidity of fluid membranes controls their equilibrium topology but is notoriously difficult to measure. In lipid mixtures, typical of living cells, linear interfaces separate liquid ordered (LO) from liquid…

软凝聚态物质 · 物理学 2020-11-04 Piermarco Fonda , Sami C. Al-Izzi , Luca Giomi , Matthew S. Turner

Computer simulations of coarse-grained molecular models for amphiphilic systems can provide insight into the the structure of amphiphiles at interfaces. They can help to identify the factors that determine the phase behavior, and they can…

软凝聚态物质 · 物理学 2007-05-23 Friederike Schmid , Dominik Düchs , Olaf Lenz , Claire Loison

Plasma membranes appear as deformable systems wherein molecules are free to move and diffuse giving rise to condensed microdomains (composed of ordered lipids, transmembrane proteins and cholesterol) surrounded by disordered lipid…

In this work, we develop a two-component coarse-grained molecular dynamics (CGMD) model for simulating the erythrocyte membrane. This proposed model possesses the key feature of combing the lipid bilayer and the erythrocyte cytoskeleton,…

生物物理 · 物理学 2017-07-25 He Li

Biomembranes, which are mainly composed of neutral and charged lipids, exhibit a large variety of functional structures and dynamics. Here, we report a coarse-grained molecular dynamics (MD) simulation of the phase separation and…

软凝聚态物质 · 物理学 2016-11-07 Hiroaki Ito , Yuji Higuchi , Naofumi Shimokawa