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相关论文: Flexible Lipid Bilayers in Implicit Solvent

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Phospholipid bilayers are a major component of the cell membrane that is in contact with physiological electrolyte solutions including salt ions. The effect of salt on the phospholipid bilayer mechanics is an active research area due to its…

软凝聚态物质 · 物理学 2023-10-16 Yaoqi Huang , Vineeth Chandran Suja , Layaa Amirthalingam , Gerald G. Fuller

Lipid bilayer membranes have a native (albeit small) permeability for water molecules. Under an external load, provided that the bilayer structure stays intact and does not suffer from poration or rupture, a lipid membrane deforms and its…

软凝聚态物质 · 物理学 2021-07-14 Bryan Quaife , Ashley Gannon , Y. -N. Young

We introduce a simulation strategy to consistently couple continuum biomembrane dynamics to the motion of discrete biological macromolecules residing within or on the membrane. The methodology is used to study the diffusion of integral…

软凝聚态物质 · 物理学 2009-05-26 Ali Naji , Paul J. Atzberger , Frank L. H. Brown

The electrostatic contribution to spontaneous membrane curvature is calculated within Poisson-Boltzmann theory under a variety of assumptions and emphasizing parameters in the physiological range. Asymmetric surface charges, either fixed…

凝聚态物理 · 物理学 2009-10-28 Tom Chou , Marko V. Jaric' , Eric D. Siggia

In multi-component soft matter, interface properties often play a key role in determining the properties of the overall system. The identification of the internal dynamic structures in non-equilibrium situations requires the interface…

软凝聚态物质 · 物理学 2016-12-28 Yasuya Nakayama , Kiyoyasu Kataoka , Toshihisa Kajiwara

Simulations of a bilayer in a liquid solvent in the full range of areas from the floppy to the extended state also show the hole/tunnel spontaneous formation. Whether this change of topology is preceded by topological fluctuations of the…

软凝聚态物质 · 物理学 2012-02-27 Jan Stecki

Lipid domains are found in systems such as multi-component bilayer membranes and single component monolayers at the air-water interface. It was shown by Andelman et al. (Comptes Rendus 301, 675 (1985)) and McConnell et al. (Phys. Chem. {\bf…

软凝聚态物质 · 物理学 2007-05-23 Alex Travesset

Water activity and its relationship with interactions stabilising lamellar stacks of mixed lipid bilayers in their fluid state are investigated by means of osmotic pressure measurements coupled with small-angle x-ray scattering. The…

For many biotechnological applications it would be useful to better understand the effects produced by electric fields on lipid membranes. This review discusses several aspects of the electrostatic properties of a planar lipid membrane with…

软凝聚态物质 · 物理学 2014-11-25 Falko Ziebert , David Lacoste

The buckling of elastic bodies is a common phenomenon in the mechanics of solids. Wrinkling of membranes can often be interpreted as buckling under constraints that prohibit large amplitude deformation. We present a combination of analytic…

软凝聚态物质 · 物理学 2007-05-23 A. Concha , J. W. McIver , P. Mellado , D. Clarke , O. Tchernyshyov , R. L. Leheny

Filaments are ubiquitous within the microscopic world. They occur frequently in both biological and industrial environments and display varied and rich dynamics. Their wide range of applications has spurred the development of a special…

流体动力学 · 物理学 2023-03-31 Lyndon Koens , Benjamin J. Walker

We investigate pores in fluid membranes by molecular dynamics simulations of an amphiphile-solvent mixture, using a molecular coarse-grained model. The amphiphilic membranes self-assemble into a lamellar stack of amphiphilic bilayers…

软凝聚态物质 · 物理学 2009-11-11 Claire Loison , Michel Mareschal , Friederike Schmid

Near a critical point, the time scale of thermally-induced fluctuations diverges in a manner determined by the dynamic universality class. Experiments have verified predicted 3D dynamic critical exponents in many systems, but similar…

统计力学 · 物理学 2015-05-27 Aurelia R. Honerkamp-Smith , Benjamin B. Machta , Sarah L. Keller

In this paper the problem of surface charge of the lipid membrane immersed in the physiological solution is considered. It is shown that both side of the bilayer phospholipid membrane surface are negatively charged. A self-consistent model…

生物物理 · 物理学 2015-05-14 M. Pekker , M. N. Shneider

We study lipid translocation ("flip-flop") between the leaflets of a planar lipid bilayer with transition path sampling (TPS). Rare flip-flops compete with biological machineries that actively establish asymmetric lipid compositions.…

软凝聚态物质 · 物理学 2025-02-18 Matthias Post , Gerhard Hummer

Softer means stickier for solid adhesives, because material compliance facilitates close contact between non-conformal surfaces. Recent discoveries have revealed that soft materials can exhibit a rich array of new physics arising from…

By evaporating a drop of lipid dispersion we generate the myelin morphology often seen in dissolving surfactant powders. We explain these puzzling nonequilibrium structures using a geometric argument: The bilayer repeat spacing increases…

软凝聚态物质 · 物理学 2007-05-23 Jung-Ren Huang , Ling-Nan Zou , Thomas A. Witten

We implement the replica exchange molecular dynamics algorithm to study the interactions of a model peptide (WALP-16) with an explicitly represented DPPC membrane bilayer. We observe the spontaneous, unbiased insertion of WALP-16 into the…

生物大分子 · 定量生物学 2007-05-23 Hugh Nymeyer , Thomas B. Woolf , Angel E. Garcia

We investigate the effect of an applied electric potential on the mechanics of a coarse grained POPC bilayer under tension. The size and duration of our simulations allow for a detailed and accurate study of the fluctuations. Effects on the…

化学物理 · 物理学 2013-11-11 Bastien Loubet , Michael Andersen Lomholt , Himanshu Khandelia

Biomembranes consisting of two opposing phospholipid monolayers, which comprise the so-called lipid bilayer, are largely responsible for the dual solid-fluid behavior of individual cells and viruses. Quantifying the mechanical…

生物物理 · 物理学 2024-05-27 Naoki Takeishi , Masaya Santo , Naoto Yokoyama , Shigeo Wada
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