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Single receptor-ligand bonds have finite lifetimes, so that biological systems can dynamically react to changes in their environment. In cell adhesion, adhesion bonds usually act cooperatively in adhesion clusters. Outside the cellular…

软凝聚态物质 · 物理学 2007-05-23 T. Erdmann , U. S. Schwarz

Adhesion interactions mediated by multiple bond types are relevant for many biological and soft matter systems, including the adhesion of biological cells and functionalized colloidal particles to various substrates. To elucidate advantages…

生物物理 · 物理学 2020-10-21 Anil K. Dasanna , Gerhard Gompper , Dmitry A. Fedosov

We present a general stochastic dynamic model of a cluster of biological complexes with fluctuating dissociation and association rates. The master equation has analytical solutions in two limiting cases: the vanishing force with reflecting…

软凝聚态物质 · 物理学 2007-05-23 Fei Liu , Zhong-can Ou-Yang

We study the cooperative rupture of multiple adhesion bonds under shared linear loading. Simulations of the appropriate Master equation are compared with numerical integration of a rate equation for the mean number of bonds and its scaling…

软凝聚态物质 · 物理学 2007-05-23 T. Erdmann , U. S. Schwarz

In biological materials, strong binding despite an applied load force is often based on clusters of dynamic bonds that share the load. Different macroscopic behaviors have been described depending on whether the load is shared locally or…

生物物理 · 物理学 2025-09-11 Yannick Lüdemann , Stefan Klumpp , Komal Bhattacharyya

Cells attach to their environment by means of focal adhesions, which are molecular complexes that exhibit the remarkable ability to adapt to mechanical load by changing their size. Drawing from the biomolecular mechanisms underlying this…

软凝聚态物质 · 物理学 2025-03-17 Anton F. Burnet , Julia Müllner , Benedikt Sabass

We simulate the collision of atomic clusters with a weakly attractive surface using molecular dynamics in a regime between soft-landing and fragmentation, where the cluster undergoes large deformation but remains intact. As a function of…

材料科学 · 物理学 2007-05-23 A. Awasthi , S. C. Hendy , P. Zoontjens , S. A. Brown

Bistability is a major mechanism for cellular decision making and usually results from positive feedback in biochemical control systems. Here we show theoretically that bistability between unbound and bound states of adhesion clusters…

亚细胞过程 · 定量生物学 2010-02-24 T. Erdmann , U. S. Schwarz

Understanding cellular response to mechanical forces is immensely important for a plethora of biological processes. Focal adhesions are multi-molecular protein assemblies that connect the cell to the extracellular matrix and play a pivotal…

生物物理 · 物理学 2019-10-25 Rumi De

Collections of cells exhibit coherent migration during morphogenesis, cancer metastasis, and wound healing. In many cases, bigger clusters split, smaller sub-clusters collide and reassemble, and gaps continually emerge. The connections…

生物物理 · 物理学 2021-03-31 Ushasi Roy , Andrew Mugler

A quantitative understanding of how cells interact with their extracellular matrix via molecular bonds is fundamental for many important processes in cell biology and engineering. In these interactions, the deformability of cells and matrix…

生物物理 · 物理学 2022-07-13 Qiangzeng Huang , Jizeng Wang

Cells in multicellular organisms adhere to the extracellular matrix through two-dimensional clusters spanning a size range from very few to thousands of adhesion bonds. For many common receptor-ligand systems, the ligands are tethered to a…

软凝聚态物质 · 物理学 2007-07-16 T. Erdmann , U. S. Schwarz

Mechanical loading generally weakens adhesive structures and eventually leads to their rupture. However, biological systems can adapt to loads by strengthening adhesions, which is essential for maintaining the integrity of tissue and whole…

生物物理 · 物理学 2024-06-03 Andrea Braeutigam , Ahmet Nihat Simsek , Gerhard Gompper , Benedikt Sabass

In various cellular processes, biofilaments like F-actin and F-tubulin are able to exploit chemical energy associated to polymerization to perform mechanical work against an external load. The force-velocity relationship quantitatively…

统计力学 · 物理学 2018-04-04 Alessia Perilli , Carlo Pierleoni , Giovanni Ciccotti , Jean-Paul Ryckaert

We investigate clustering of malignant glioma cells. \emph{In vitro} experiments in collagen gels identified a cell line that formed clusters in a region of low cell density, whereas a very similar cell line (which lacks an important…

In many cellular signaling pathways, key components form clusters at the cell membrane. Although much work has focused on the mechanisms behind such cluster formation, the implications for downstream signaling remain poorly understood.…

分子网络 · 定量生物学 2012-03-14 Andrew Mugler , Aimee Gotway Bailey , Koichi Takahashi , Pieter Rein ten Wolde

Receptor-ligand binding is a critical first step in signal transduction and the duration of the interaction can impact signal generation. In mammalian cells, clustering of receptors may be facilitated by heterogeneous zones of lipids, known…

亚细胞过程 · 定量生物学 2009-11-10 Manoj Gopalakrishnan , Kimberly Forsten-Williams , Matthew A. Nugent , Uwe C. Tauber

A key challenge in multiphase flow through porous media is to understand and predict the conditions under which trapped fluid clusters become mobilized. Here, we investigate the stability of such clusters in two-phase flow and present a…

流体动力学 · 物理学 2025-10-21 Mathias Klahn , Gaute Linga , Tanguy Le Borgne , Joachim Mathiesen

Biological adhesion often involves several pairs of specific receptor-ligand molecules. Using rate equations, we study theoretically the rupture of such multiple parallel bonds under dynamic loading assisted by thermal activation. For a…

生物物理 · 物理学 2009-11-06 Udo Seifert

We present a stochastic model which describes fronts of cells invading a wound. In the model cells can move, proliferate, and experience cell-cell adhesion. We find several qualitatively different regimes of front motion and analyze the…

细胞行为 · 定量生物学 2009-11-13 Evgeniy Khain , Leonard M. Sander , Casey M. Schneider-Mizell
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