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相关论文: Penna bit-string model with constant population

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We twice modify the Penna model for biological ageing. First we introduce back (good) mutations and a memory for them into the model. It allows us to observe an improvement of the species fitness over long time scales as well as punctuated…

统计力学 · 物理学 2015-06-24 S. Moss de Oliveira , D. Stauffer , P. M. C de Oliveira , J. S. Sa Martins

A large amount of population models use the concept of a carrying capacity. Simulated populations are bounded by invoking finite resources through a survival probability, commonly referred to as the Verhulst factor. The fact, however, that…

种群与进化 · 定量生物学 2015-05-19 C. M. N. Pinol , R. S. Banzon

In this paper the Penna model is reconsidered. With computer simulations we check how the control parameters of the model influence the size of the stable population.

种群与进化 · 定量生物学 2007-05-23 K. Malarz , M. Sitarz , P. Gronek , A. Dydejczyk

The Penna model is a strategy to simulate the genetic dynamics of age-structured populations, in which the individuals genomes are represented by bit-strings. It provides a simple metaphor for the evolutionary process in terms of the…

种群与进化 · 定量生物学 2009-11-11 Veit Schwämmle , Suzana M. de Oliveira

The concept of a carrying capacity is essential in most models to prevent unlimited growth. Despite the large amount of deaths it introduces, the actual influence of the Verhulst term in simulations is often times not accounted for.…

种群与进化 · 定量生物学 2010-11-30 Chrysline Margus Pinol , Ronald Banzon

In 1995 T.J.Penna introduced a simple model of biological aging. A modified Penna model has been demonstrated to exhibit behaviour of real-life systems including catastrophic senescence in salmon and a mortality plateau at advanced ages. We…

种群与进化 · 定量生物学 2007-05-23 J. B. Coe , Y. Mao

We generalize the standard Penna bit-string model of biological ageing by assuming that each deleterious mutation diminishes the survival probability in every time interval by a small percentage. This effect is added to the usual lethal but…

统计力学 · 物理学 2015-06-24 J. S. Sá Martins , D. Stauffer

A stochastic genetic model for biological aging is introduced bridging the gap between the bit-string Penna model and the Pletcher-Neuhauser approach. The phenomenon of exponentially increasing mortality function at intermediate ages and…

统计力学 · 物理学 2007-05-23 Zhi-Feng Huang , Dietrich Stauffer

We represent a process of learning by using bit strings, where 1-bits represent the knowledge acquired by individuals. Two ways of learning are considered: individual learning by trial-and-error; and social learning by copying knowledge…

种群与进化 · 定量生物学 2007-05-23 Armando Ticona Bustillos , Paulo Murilo C. de Oliveira

The Penna bit-string model successfully encompasses many phenomena of population evolution, including inheritance, mutation, evolution and ageing. If we consider social interactions among individuals in the Penna model, the population will…

无序系统与神经网络 · 物理学 2009-11-11 Chunguang Li , Philip K. Maini

We build upon our previous analytical results for the Penna model of senescence to include positive mutations. We investigate whether a small but non-zero positive mutation rate gives qualitatively different results to the traditional Penna…

种群与进化 · 定量生物学 2007-05-23 J. B. Coe , Y. Mao , M. E. Cates

The Penna model is a model of evolutionary ageing through mutation accumulation where traditionally time and the age of an organism are treated as discrete variables and an organism's genome by a binary bit string. We reformulate the…

种群与进化 · 定量生物学 2007-05-23 J. B. Coe , Y. Mao

The phase diagrams survival-extinction for the Penna model with parameters: (mutations rate)-(birth rate), (mutation rate)-(harmful mutations threshold), (harmful mutation threshold)-(minimal reproduction age) are presented. The extinction…

种群与进化 · 定量生物学 2007-05-23 K. Malarz

Assuming the deleterious mutations in the Penna ageing model to affect mainly the young ages, we get an enhanced mortality at very young age, followed by a minimum of the mortality, and then the usual exponential increase of mortality with…

种群与进化 · 定量生物学 2007-08-28 D. Stauffer , S. Moss de Oliveira

We present some results of simulations of population growth and evolution, using the standard asexual Penna model, with individuals characterized by a string of bits representing a genome containing some possible mutations. After about…

种群与进化 · 定量生物学 2009-11-11 Mikolaj Sitarz , Andrzej Z. Maksymowicz

We present some analytic results for the steady states of the Penna model of sen escence, generalised to allow genetically identical individuals to die at differ ent ages via an arbitrary survival function. Modelling this with a Fermi…

软凝聚态物质 · 物理学 2009-11-07 J. B. Coe , Y. Mao , M. E. Cates

The standard Penna ageing model with sexual reproduction is enlarged by adding additional bit-strings for love: Marriage happens only if the male love strings are sufficiently different from the female ones. We simulate at what level of…

种群与进化 · 定量生物学 2015-05-19 D. Stauffer , S. Cebrat , T. J. P. Penna , A. O. Sousa

We succeeded in obtaining exact results of the bit-string model of biological aging for populations whose individuals breed only once. These results are in excellent agreement with those obtained through computer simulations. In addition,…

adap-org · 物理学 2009-10-28 T. J. P. Penna , S. Moss de Oliveira

We have simulated demographic changes in the human population using the Penna microscopic model, based on the simple Monte Carlo method. The results of simulations have shown that during a few generations changes in the genetic pool of a…

统计力学 · 物理学 2007-05-23 A. Laszkiewicz , Sz. Szymczak , S. Cebrat

We describe the simulation method of modelling the population evolution using Monte Carlo based on the Penna model. Individuals in the populations are represented by their diploid genomes. Genes expressed after the minimum reproduction age…

基因组学 · 定量生物学 2009-01-13 Agnieszka Laszkiewicz , Przemyslaw Biecek , Katarzyna Bonkowska , Stanislaw Cebrat
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