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Seeking effective neural networks is a critical and practical field in deep learning. Besides designing the depth, type of convolution, normalization, and nonlinearities, the topological connectivity of neural networks is also important.…

计算机视觉与模式识别 · 计算机科学 2020-08-20 Kun Yuan , Quanquan Li , Jing Shao , Junjie Yan

One major challenge of neuroscience is finding interesting structures in a seemingly disorganized neural activity. Often these structures have computational implications that help to understand the functional role of a particular brain…

神经元与认知 · 定量生物学 2023-09-01 Srdjan Ostojic , Stefano Fusi

Several approaches to cognition and intelligence research rely on statistics-based models testing, namely factor analysis. In the present work we exploit the emerging dynamical systems perspective putting the focus on the role of the…

物理与社会 · 物理学 2018-03-15 Gemma Rosell-Tarragó , Emanuele Cozzo , Albert Díaz-Guilera

Vascular networks play a crucial role in understanding brain functionalities. Brain integrity and function, neuronal activity and plasticity, which are crucial for learning, are actively modulated by their local environments, specifically…

神经元与认知 · 定量生物学 2024-02-28 Jiachen Yao , Nina Hagemann , Qiaojie Xiong , Jianxu Chen , Dirk M. Hermann , Chao Chen

A recurrent neural network model storing multiple spatial maps, or ``charts'', is analyzed. A network of this type has been suggested as a model for the origin of place cells in the hippocampus of rodents. The extremely diluted and fully…

无序系统与神经网络 · 物理学 2009-10-31 Francesco P. Battaglia , Alessandro Treves

The brain is a complex organ characterized by heterogeneous patterns of structural connections supporting unparalleled feats of cognition and a wide range of behaviors. New noninvasive imaging techniques now allow these patterns to be…

神经元与认知 · 定量生物学 2020-04-03 Christopher W. Lynn , Danielle S. Bassett

Complex networks are ubiquitous in nature and play a role of paramount importance in many contexts. Internet and the cyberworld, which permeate our everyday life, are self-organized hierarchical graphs. Urban traffic flows on intricate road…

物理与社会 · 物理学 2014-08-08 Francesca Di Patti , Duccio Fanelli , Francesco Piazza

The architecture of biological networks has been reported to exhibit high level of modularity, and to some extent, topological modules of networks overlap with known functional modules. However, how the modular topology of the molecular…

分子网络 · 定量生物学 2007-09-07 Jing Zhao , Guo-Hui Ding , Lin Tao , Hong Yu , Zhong-Hao Yu , Jian-Hua Luo , Zhi-Wei Cao , Yi-Xue Li

Cognitive maps are a proposed concept on how the brain efficiently organizes memories and retrieves context out of them. The entorhinal-hippocampal complex is heavily involved in episodic and relational memory processing, as well as spatial…

神经元与认知 · 定量生物学 2024-01-04 Paul Stoewer , Achim Schilling , Andreas Maier , Patrick Krauss

In present paper we discuss several approaches to reconstructing the topology of the physical space from neural activity data of CA1 fields in mice hippocampus, in particular, having Cognitome theory of brain function in mind. In our…

The study of the sub-structure of complex networks is of major importance to relate topology and functionality. Many efforts have been devoted to the analysis of the modular structure of networks using the quality function known as…

数据分析、统计与概率 · 物理学 2011-07-01 Belkacem Serrour , Alex Arenas , Sergio Gomez

Recent studies of animal social networks have significantly increased our understanding of animal behavior, social interactions, and many important ecological and epidemiological processes. However, most of the studies are at low temporal…

种群与进化 · 定量生物学 2017-02-08 Shi Chen , Amiyaal Ilany , Brad J. White , Michael W. Sanderson , Cristina Lanzas

Cellular function is widely believed to be organized in a modular fashion. On all scales and at all levels of complexity, relatively independent sub-units perform relatively independent sub-tasks of biological function. This functional…

分子网络 · 定量生物学 2010-12-22 Stefan Pinkert , Joerg Schultz , Joerg Reichardt

A complex network is a condensed representation of the relational topological framework of a complex system. A main reason for the existence of such networks is the transmission of items through the entities of these complex systems. Here,…

物理与社会 · 物理学 2018-04-18 María Pereda , Ernesto Estrada

Neural computation is associated with the emergence, reconfiguration and dissolution of cell assemblies in the context of varying oscillatory states. Here, we describe the complex spatio-temporal dynamics of cell assemblies through temporal…

神经元与认知 · 定量生物学 2020-01-20 Nicola Pedreschi , Christophe Bernard , Wesley Clawson , Pascale Quilichini , Alain Barrat , Demian Battaglia

This article discusses how the individual morphological properties of basic objects (e.g. neurons, molecules and aggregates), jointly with their particular spatial distribution, can determine the connectivity and dynamics of systems…

分子网络 · 定量生物学 2007-05-23 Luciano da Fontoura Costa

It is important to understand the coordinated performance of cells in tissue. One possible mechanism in this coordination involves intracellular calcium signaling. The topology of intercellular connections in tissue should also play an…

生物物理 · 物理学 2007-10-22 Irina V. Dokukina , Maria E. Gracheva , Eugene A. Grachev , James D. Gunton

Correlated fluctuations in the activity of neural populations reflect the network's dynamics and connectivity. The temporal and spatial dimensions of neural correlations are interdependent. However, prior theoretical work mainly analyzed…

神经元与认知 · 定量生物学 2022-07-19 Yan-Liang Shi , Roxana Zeraati , Anna Levina , Tatiana A. Engel

Recently, there has been increased interest in fusing multimodal imaging to better understand brain organization. Specifically, accounting for knowledge of anatomical pathways connecting brain regions should lead to desirable outcomes such…

应用统计 · 统计学 2018-03-02 Ixavier A. Higgins , Suprateek Kundu , Ying Guo

A fundamental problem in the study of complex networks is to provide quantitative measures of correlation and information flow between different parts of a system. To this end, several notions of communicability have been introduced and…

物理与社会 · 物理学 2015-04-08 Ernesto Estrada , Naomichi Hatano , Michele Benzi