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Elucidating the fitness measures optimized during the evolution of complex biological systems is a major challenge in evolutionary theory. We present experimental evidence and an analytical framework demonstrating how biochemical networks…

分子网络 · 定量生物学 2008-06-17 Raj Chakrabarti , Herschel Rabitz , George McLendon

We perform a detailed study of a simple mathematical model addressing the problem of optimally regulating a process subject to periodic external forcing, which is interesting both in view of its direct applications and as a prototype for…

最优化与控制 · 数学 2025-03-04 Nir Gavish , Guy Katriel

Diffusion models have demonstrated impressive capabilities in synthesizing diverse content. However, despite their high-quality outputs, these models often perpetuate social biases, including those related to gender and race. These biases…

计算机视觉与模式识别 · 计算机科学 2025-03-27 Yingdong Shi , Changming Li , Yifan Wang , Yongxiang Zhao , Anqi Pang , Sibei Yang , Jingyi Yu , Kan Ren

Simulation-based inference enables learning the parameters of a model even when its likelihood cannot be computed in practice. One class of methods uses data simulated with different parameters to infer models of the likelihood-to-evidence…

机器学习 · 计算机科学 2022-06-08 Giulio Isacchini , Natanael Spisak , Armita Nourmohammad , Thierry Mora , Aleksandra M. Walczak

We analyze information diffusion using empirical data that tracks online communication around two instances of mass political mobilization, including the year that lapsed in-between the protests. We compare the global properties of the…

We present a simple model for describing the dynamics of the interaction between a homogeneous population or society, and the natural resources and reserves that the society needs for its survival. The model is formulated in terms of…

物理与社会 · 物理学 2020-04-22 Basil Grammaticos , Ralph Willox , Junkichi Satsuma

The hierarchical product of networks represents a natural tool for building large networks out of two smaller subnetworks: a primary subnetwork and a secondary subnetwork. Here we study the dynamics of diffusion and synchronization…

适应与自组织系统 · 物理学 2017-10-11 Per Sebastian Skardal

We analyze transport on a graph with multiple constraints and where the weight of the edges connecting the nodes is a dynamical variable. The network dynamics results from the interplay between a nonlinear function of the flow, dissipation,…

统计力学 · 物理学 2023-11-28 Frederic Folz , Kurt Mehlhorn , Giovanna Morigi

Pattern formation often occurs in confined systems, yet how boundaries shape patterning dynamics is unclear. We develop techniques to analyze confinement effects in nonlocal advection-diffusion equations, which generically capture the…

斑图形成与孤子 · 物理学 2025-09-11 Jan Rombouts , Michael L Zhao , Alexander Aulehla , Anna Erzberger

Dynamical systems are frequently used to model biological systems. When these models are fit to data it is necessary to ascertain the uncertainty in the model fit. Here we present prediction deviation, a new metric of uncertainty that…

应用统计 · 统计学 2017-06-08 Benjamin Letham , Portia A. Letham , Cynthia Rudin , Edward P. Browne

Risks threatening modern societies form an intricately interconnected network that often underlies crisis situations. Yet, little is known about how risk materializations in distinct domains influence each other. Here we present an approach…

计算机与社会 · 计算机科学 2016-05-03 Boleslaw K. Szymanski , Xin Lin , Andrea Asztalos , Sameet Sreenivasan

This paper formulates a framework for the analysis and distributed control of interconnected systems from the behavioural perspective. The discussions are carried out from the viewpoint of set theory and the results are completely…

系统与控制 · 电气工程与系统科学 2021-03-19 Yitao Yan , Jie Bao , Biao Huang

In this thesis we aim to analyze and quantify the energetic and information contents that can be extracted from a dynamical system subject to the external environment. The latter is usually assumed to be deleterious for the feasibility of…

量子物理 · 物理学 2018-05-07 Stefano Gherardini

In this paper we investigate networks whose evolution is governed by the interaction of a random assembly process and an optimization process. In the first process, new nodes are added one at a time and form connections to randomly selected…

无序系统与神经网络 · 物理学 2011-05-16 Markus Brede

Representation of cities as organisms with metabolic processes is a useful analogy for urban design, development and sustainability. Urban metabolism can be modeled by representing urban systems as networks. The various networks included in…

物理与社会 · 物理学 2026-04-09 Bharat Sharma , Abhilasha J. Saroj , Evan Scherrer , Melissa R. Allen-Dumas

The increasing prominence of temporal networks in online social platforms and dynamic communication systems has made influence maximization a critical research area. Various diffusion models have been proposed to capture the spread of…

社会与信息网络 · 计算机科学 2025-07-31 Aaqib Zahoor , Iqra Altaf Gillani , Janibul Bashir

Motivated by the applications, a class of optimal control problems is investigated, where the goal is to influence the behavior of a given population through another controlled one interacting with the first. Diffusive terms accounting for…

最优化与控制 · 数学 2023-03-10 Stefano Almi , Marco Morandotti , Francesco Solombrino

Optimization problems in engineering and applied mathematics are typically solved in an iterative fashion, by systematically adjusting the variables of interest until an adequate solution is found. The iterative algorithms that govern these…

最优化与控制 · 数学 2022-05-31 Laurent Lessard

We formulate a very general framework for optimal dynamic stochastic control problems which allows for a control-dependent informational structure. The issue of informational consistency is investigated. Bellman's principle is formulated…

概率论 · 数学 2018-05-16 Saul Jacka , Matija Vidmar

We consider a broad class of stochastic imitation dynamics over networks, encompassing several well known learning models such as the replicator dynamics. In the considered models, players have no global information about the game…

系统与控制 · 计算机科学 2021-03-02 Lorenzo Zino , Giacomo Como , Fabio Fagnani