相关论文: Comment on " A simple model for DNA denaturation"
Molecular biology explains function of molecules by their geometrical and electronical structures that are mainly determined by utilization of quantum effects in chemistry. However, further quantum effects are not thought to play any…
Genome-wide association studies, in which as many as a million single nucleotide polymorphisms (SNP) are measured on several thousand samples, are quickly becoming a common type of study for identifying genetic factors associated with many…
The goal of the work was to study the role of GC alternative dimmers in the binding of DNA with Ni (II) ions. The method of ultraviolet difference spectroscopy has been applied to investigate Ni (II) ions interactions with DNA extracted…
The dynamics of the DNA denaturation is studied using the Peyrard-Bishop-Dauxois model. The denaturation rate of double stranded polymers decreases exponentially as function of length below the denaturation temperature. Above Tc, the rate…
The authors of the paper, Limited surface mobility inhibits stable glass formation for 2-ethyl-1-hexanol, J. Chem. Phys. 146, 203317 (2017), encountered two problems in considering applicability of the Coupling Model. We show in this…
This comment is hereby withdrawn, because the paper by D. Seibert, KSUCNR-005-94 and nucl-th/9403005 was withdrawn and it was acknowleged that the parton cascade model does approach chemical equilibrium correctly. Therefore our reply to…
We establish a simple, explicit relation between the formalisms employed in the treatments of polarization observables in deuteron two-body electrodisintegration published by Arenh\"ovel, Leidemann, and Tomusiak in Few-Body Systems {\bf…
Withdrawn. Submittal to journal withdrawn by author in Dec 1999.
Motivated by long-range dispersal in ecological systems, we formulate and apply a general strong-disorder renormalization group (SDRG) framework to describe one-dimensional disordered contact processes with heavy-tailed, such as power law,…
On the basis of the classical theory of envelopes, we formulate the renormalization group (RG) method for global analysis, recently proposed by Goldenfeld et al. It is clarified why the RG equation improves things.
We report on the nature of the thermal denaturation transition of homogeneous DNA as determined from a renormalisation group analysis of the Peyrard-Bishop-Dauxois model. Our approach is based on an analogy with the phenomenon of critical…
Recent theoretical predictions on DNA mechanical separation induced by pulling forces are numerically tested within a model in which self-avoidance for DNA strands is fully taken into account. DNA strands are described by interacting pairs…
We consider a general model of a heterogeneous polymer chain fluctuating in the proximity of an interface between two selective solvents. The heterogeneous character of the model comes from the fact that the monomer units interact with the…
We suggest a possible correlation between the ionization events caused by the background neutron radiation and the experimental data on mutations with damage in the DNA repair mechanism, coming from the Long Term Evolution Experiment in E.…
Biomedical entity linking (BioEL) has achieved remarkable progress with the help of pre-trained language models. However, existing BioEL methods usually struggle to handle rare and difficult entities due to long-tailed distribution. To…
The issue of retarded long-range resonant interactions between two molecules with oscillating dipole moments is reinvestigated within the framework of classical electrodynamics. By taking advantage of a theorem in complex analysis, we…
We discuss examples of (1+1)-dimensional models where the perturbative renormalization group (RG) indicates a tendency to restore the symmetry in the strong coupling limit. We show that such restoration does occur sometimes, but the…
We summarize recent efforts to develop an angular-momentum-conserving variant of the Density Matrix Renormalization Group method into a practical truncation strategy for large-scale shell model calculations of atomic nuclei. Following a…
Recently, several methods have leveraged deep generative modeling to produce example-based explanations of image classifiers. Despite producing visually stunning results, these methods are largely disconnected from classical explainability…
The Poland-Scheraga model describes the denaturation transition of two complementary - in particular, equally long - strands of DNA, and it has enjoyed a remarkable success both for quantitative modeling purposes and at a more theoretical…