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Branching in vascular networks and in overall organismic form is one of the most common and ancient features of multicellular plants, fungi, and animals. By combining machine-learning techniques with new theory that relates vascular form to…

It was hypothesized that the structures of biological transport networks are the result of either energy consumption or adaptation dynamics. Although approaches based on these hypotheses can produce optimal network and form loop structures,…

生物物理 · 物理学 2024-09-13 Yawei Wang , Zilu Qin , Yubo Fan

A model is proposed to minimize the total volume of the main distribution networks of fluids in organs such as the kidney and the lung. A consequence of the minimization analysis is that the optimal overall form of the organs is a modified…

组织与器官 · 定量生物学 2007-05-23 Walton R. Gutierrez

We present experimental evidence of multiple blood flow configurations in a relatively simple microfluidic network under constant inlet conditions. We provide evidence of multistability and unsteady dynamics and find good agreement with a…

流体动力学 · 物理学 2024-10-08 Mathieu Alonzo , Nathaniel J. Karst , Thomas Podgorski , John B. Geddes , Gwennou Coupier

In this paper, we are concerned with the simulation of blood flow in microvascular networks and the surrounding tissue. To reduce the computational complexity of this issue, the network structures are modeled by a one-dimensional graph,…

数值分析 · 数学 2023-05-01 Ettore Vidotto , Timo Koch , Tobias Köppl , Rainer Helmig , Barbara Wohlmuth

Understanding of vascular organization is a long-standing problem in quantitative biology and biophysics and is essential for the growth of large cultured tissues. Approaches are needed that (1) make predictions of optimal arteriovenous…

组织与器官 · 定量生物学 2023-08-25 James P. Hague

We derive a convex optimization problem on a steady-state nonequilibrium network of biochemical reactions, with the property that energy conservation and the second law of thermodynamics both hold at the problem solution. This suggests a…

分子网络 · 定量生物学 2011-09-20 Ronan M. T. Fleming , Christopher M. Maes , Michael A. Saunders , Yinyu Ye , Bernhard Ø. Palsson

Despite decades of research on blood flow, an analogue of Navier-Stokes equations that accurately describe blood flow properties has not been established yet. The reason behind this is that the properties of blood flow seem \`a priori non…

The vascular network of leaves, comprising xylem and phloem, is a highly optimized system for the delivery of water, nutrients, and sugars. The design rules for these naturally occurring networks have been studied since the time of Leonardo…

生物物理 · 物理学 2024-11-01 Lars Erik J. Skjegstad , Julius B. Kirkegaard

In cerebrovascular networks, some vertices are more connected to each other than with the rest of the vasculature, defining a community structure. Here, we introduce a class of model networks built by rewiring Random Regular Graphs, which…

生物物理 · 物理学 2022-07-19 Florian Goirand , Bertrand Georgeot , Olivier Giraud , Sylvie Lorthois

Optimizing the energy efficiency of driving processes provides valuable insights into the underlying physics and is of crucial importance for numerous applications, from biological processes to the design of machines and robots. Knowledge…

软凝聚态物质 · 物理学 2024-04-02 Sarah A. M. Loos , Samuel Monter , Felix Ginot , Clemens Bechinger

In this article we develop a duality principle and concerning computational method for a structural optimization problem in elasticity. We consider the problem of finding the optimal topology for an elastic solid which minimizes its…

最优化与控制 · 数学 2019-11-13 Fabio Botelho , Alexandre Molter

We introduce an optimum principle for a vehicular traffic network with road bottlenecks. This network breakdown minimization (BM) principle states that the network optimum is reached, when link flow rates are assigned in the network in such…

物理与社会 · 物理学 2011-02-14 Boris S. Kerner

We present a general holistic theory for the organization of complex networks, both human-engineered and naturally-evolved. Introducing concepts of value of interactions and satisfaction as generic network performance measures, we show that…

适应与自组织系统 · 物理学 2007-07-13 Venkat Venkatasubramanian , Dimitris N. Politis , Priyan R. Patkar

Power minimisation in branched fluidic networks has gained significant attention in biology and engineering. The optimal network is defined by channel radii that minimise the sum of viscous dissipation and the volumetric energetic cost of…

流体动力学 · 物理学 2025-01-16 Jan Siemen Smink , Rob Hagmeijer , Cornelis Henricus Venner , Claas Willem Visser

Coupling hemodynamics with vessel wall growth and remodeling (G&R) is crucial for understanding pathology at distal vasculature to study progression of incurable vascular diseases, such as pulmonary arterial hypertension. The present study…

生物物理 · 物理学 2020-01-15 Vasilina Filonova , Hamidreza Gharahi , Nitesh Nama , Seungik Baek , C. Alberto Figueroa

We consider two variational models for transport networks, an urban planning and a branched transport model, in which the degree of network complexity and ramification is governed by a small parameter $\varepsilon>0$. Smaller $\varepsilon$…

经典分析与常微分方程 · 数学 2017-11-16 Alessio Brancolini , Benedikt Wirth

In animals, gas exchange between blood and tissues occurs in narrow vessels, whose diameter is comparable to that of a red blood cell. Red blood cells must deform to squeeze through these narrow vessels, transiently blocking or occluding…

Highly-optimized complex transport networks serve crucial functions in many man-made and natural systems such as power grids and plant or animal vasculature. Often, the relevant optimization functional is non-convex and characterized by…

生物物理 · 物理学 2016-09-23 Henrik Ronellenfitsch , Eleni Katifori

The prevailing theory for metabolic scaling is based on area-preserved, space-filling fractal vascular networks. However, it's known both theoretically and experimentally that animals' vascular systems obey Murray's cubic branching law.…

定量方法 · 定量生物学 2022-05-31 Jinkui Zhao