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Collections of cells exhibit coherent migration during morphogenesis, cancer metastasis, and wound healing. In many cases, bigger clusters split, smaller sub-clusters collide and reassemble, and gaps continually emerge. The connections…

生物物理 · 物理学 2021-03-31 Ushasi Roy , Andrew Mugler

We examine microscopic mechanisms for coupling stochastic oscillators so that they display similar and correlated temporal variations. Unlike oscillatory motion in deterministic dynamical systems, complete synchronization of stochastic…

定量方法 · 定量生物学 2009-09-29 Amitabha Nandi , G. Santhosh , R. K. Brojen Singh , Ram Ramaswamy

The behaviors of coupled chaotic oscillators before complete synchronization were investigated. We report three phenomena: (1) The emergence of long-time residence of trajectories besides one of the saddle foci; (2) The tendency that orbits…

混沌动力学 · 物理学 2009-11-11 Bin Ao , Zhigang Zheng

A mode-coupling theory for dense polymeric systems is developed which unifyingly incorporates the segmental cage effect relevant for structural slowing down and polymer chain conformational degrees of freedom. An ideal glass transition of…

软凝聚态物质 · 物理学 2009-11-07 S. -H. Chong , M. Fuchs

We consider networks of coupled stochastic oscillators. When coupled we find strong collective oscillations, while each unit remains stochastic. In the limit (N\to \infty) we derive a system of integro-delay equations and show analytically…

统计力学 · 物理学 2007-05-23 B. Naundorf , T. Prager , L. Schimansky-Geier

A system of active colloidal particles driven by harmonic potentials to oscillate about the vertices of a regular polygon, with hydrodynamic coupling between all particles, is described by a piece-wise linear model which exhibits various…

统计力学 · 物理学 2013-05-30 Giovanni M. Cicuta , Enrico Onofri , Marco Cosentino Lagomarsino , Pietro Cicuta

We introduce the simplest model to describe parametric interactions in a quadratically nonlinear optical medium with the fundamental harmonic containing two components with (slightly) different carrier frequencies [which is a direct analog…

斑图形成与孤子 · 物理学 2009-11-07 I. N. Towers , B. A. Malomed

The Cellular Potts Model (CPM) has been used for simulating various biological phenomena such as differential adhesion, fruiting body formation of the slime mold Dictyostelium discoideum, angiogenesis, cancer invasion, chondrogenesis in…

生物物理 · 物理学 2009-11-11 Mark Alber , Nan Chen , Tilmann Glimm , Pavel M. Lushnikov

Collective motion of cells is common in many physiological processes, including tissue development, repair, and tumor formation. Recent experiments have shown that certain malignant cancer cells form clusters in a chemoattractant gradient,…

生物物理 · 物理学 2017-05-02 Katherine Copenhagen , Gema Malet-Engra , Weimiao Yu , Giorgio Scita , Nir Gov , Ajay Gopinathan

We make a short review about the synchronization in coupled phase oscillator models. Next, we study the common-noise-induced synchronization among active rotators. At an intermediate noise strength, the noise-induced synchronization takes…

适应与自组织系统 · 物理学 2015-05-13 Hidetsugu Sakaguchi

Chemotaxis describes the intricate interplay of cellular motion in response to a chemical signal. We here consider the case of slab geometry which models chemotactic motion between two infinite membranes. Like previous works, we are…

偏微分方程分析 · 数学 2026-01-16 Herbert Egger , Kathrin Hellmuth , Nora Philippi , Matthias Schlottbom

Coupled oscillator networks often display transitions between qualitatively different phase-locked solutions -- such as synchrony and rotating wave solutions -- following perturbation or parameter variation. In the limit of weak coupling,…

We analyze the physical mechanisms leading either to synchronization or to the formation of spatio-temporal patterns in a lattice model of pulse-coupled oscillators. In order to make the system tractable from a mathematical point of view we…

统计力学 · 物理学 2009-10-30 Albert Diaz-Guilera , Conrad J. Perez , Alex Arenas

Optimization of mutual synchronization between a pair of limit-cycle oscillators with weak symmetric coupling is considered in the framework of the phase reduction theory. By generalizing a previous study on the optimization of…

适应与自组织系统 · 物理学 2019-10-09 Nobuhiro Watanabe , Yuzuru Kato , Sho Shirasaka , Hiroya Nakao

We extend the model of exciton-plasmon materials to include a ro-vibrational structure of molecules using wave-packet propagations on electronic potential energy surfaces. The new model replaces conventional two-level emitters with more…

介观与纳米尺度物理 · 物理学 2017-08-18 Maxim Sukharev , Eric Charron

In many biological systems localized mechanical information is transmitted by mechanically neutral chemical signals. Typical examples include contraction waves in acto-myosin cortex at cellular scale and peristaltic waves at tissue level.…

软凝聚态物质 · 物理学 2025-11-25 Lev Truskinovsky , Giuseppe Zurlo

We study the mobility of a charged colloidal particle in a constant homogeneous electric field by means of computer simulations. The simulation method combines a lattice Boltzmann scheme for the fluid with standard Langevin dynamics for the…

软凝聚态物质 · 物理学 2007-06-20 Vladimir Lobaskin , Burkhard Duenweg , Christian Holm

We study the effect of chemotactic signaling among mesenchymal cells. We show that the particular physiology of the mesenchymal cells allows one-dimensional collapse in contrast to the case of bacteria, and that the mesenchymal…

细胞行为 · 定量生物学 2009-11-10 Carlos Escudero

Complex biological processes involve collective behavior of entities (bacteria, cells, animals) over many length and time scales and can be described by discrete models that track individuals or by continuum models involving densities and…

软凝聚态物质 · 物理学 2023-11-16 F. Terragni , W. D. Martinson , M. Carretero , P. K. Maini , L. L. Bonilla

The condensation transition, leading to complete mutual synchronization in large populations of globally coupled chaotic Roessler oscillators, is investigated. Statistical properties of this transition and the cluster structure of partially…

adap-org · 物理学 2009-10-30 D. H. Zanette , A. S. Mikhailov