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Many mechanisms, functions and structures of life have been unraveled. However, the fundamental driving force that propelled chemical evolution and led to life has remained obscure. The 2nd law of thermodynamics, written as an equation of…

种群与进化 · 定量生物学 2009-10-15 Arto Annila , Erkki Annila

A coarse-grained molecular model, which consists of a spherical particle and an orientation vector, is proposed to simulate lipid membrane on a large length scale. The solvent is implicitly represented by an effective attractive interaction…

软凝聚态物质 · 物理学 2015-05-20 Hiroshi Noguchi

Previous studies modelled the origin of life and the emergence of photosynthesis on the early Earth-i.e. the origin of plants-in terms of biological heat engines that worked on thermal cycling caused by suspension in convecting water. In…

生物物理 · 物理学 2015-05-13 Anthonie W. J. Muller

This article summarizes a variety of physical mechanisms proposed in the literature, which can generate micro- and nanodomains in multicomponent lipid bilayers and biomembranes. It mainly focusses on lipid-driven mechanisms that do not…

生物物理 · 物理学 2016-11-16 Friederike Schmid

It is often stated that there are no laws in biology, where everything is contingent and could have been otherwise, being solely the result of historical accidents. Furthermore, the customary introduction of fundamental biological entities…

其他定量生物学 · 定量生物学 2014-04-16 Jean-Louis Sikorav , Alan Braslau , Arach Goldar

Natural evolution has produced a tremendous diversity of functional organisms. Many believe an essential component of this process was the evolution of evolvability, whereby evolution speeds up its ability to innovate by generating a more…

神经与进化计算 · 计算机科学 2019-02-15 Joost Huizinga , Kenneth O. Stanley , Jeff Clune

We investigate pores in fluid membranes by molecular dynamics simulations of an amphiphile-solvent mixture, using a molecular coarse-grained model. The amphiphilic membranes self-assemble into a lamellar stack of amphiphilic bilayers…

软凝聚态物质 · 物理学 2009-11-11 Claire Loison , Michel Mareschal , Friederike Schmid

We introduce the BioBeta Framework, a meta-model for both protein-level and membrane-level interactions of living cells. This formalism aims to provide a formal setting where to encode, compare and merge models at different abstraction…

计算工程、金融与科学 · 计算机科学 2009-11-25 Giorgio Bacci , Davide Grohmann , Marino Miculan

We consider a diffuse interface approximation for the lipid phases of rotationally symmetric two-phase bilayer membranes and rigorously derive its $\Gamma$-limit. In particular, we prove that limit vesicles are $C^1$ across interfaces,…

偏微分方程分析 · 数学 2016-03-17 Michael Helmers

Biomembranes, primarily composed of lipid bilayers, are not merely passive barriers but dynamic and complex materials whose shapes are governed by the principles of soft matter physics. This review explores the shape problem in biomembranes…

计算物理 · 物理学 2026-05-05 Zhong-Can Ou-Yang , Tao Xu

We discuss a simple model of co-evolution. In order to emphasise the effect of interaction between individuals the entire population is subjected to the same physical environment. Species are emergent structures and extinction, origination…

统计力学 · 物理学 2007-05-23 Kim Christensen , Simone A. di Collobiano , Matt Hall , Henrik J. Jensen

Modern biological tools have made it possible to unequivocally demonstrate the deep relationship among species in terms of genes and basic molecular mechanisms. In addition, results from genetic, physical and physiological approaches…

种群与进化 · 定量生物学 2019-03-11 Jacques H. Daniel

All living cells interact dynamically with a constantly changing world. Eukaryotes in particular, evolved radically new ways to sense and react to their environment. These advances enabled new and more complex forms of cellular behavior in…

生物物理 · 物理学 2021-02-01 Kirsty Y. Wan , Gáspár Jékely

The Hadean, once thought to be uninhabitable and tumultuous, has more recently been recontextualized as a clement time in which oceans, land, and life likely appeared on Earth. This non-exhaustive chapter follows multiple threads from…

地球与行星天体物理 · 物理学 2024-11-01 Christopher K Jones , Michaela Leung , Chenyi Tu , Saleheh Ebadirad , Nate Marshall , Lin Tan , Tim Lyons

The emergence of multicellularity and developmental programs are among the major problems of evolutionary biology. Traditionally, research in this area has been based on the combination of data analysis and experimental work on one hand and…

种群与进化 · 定量生物学 2014-03-14 Ricard V. Solé , Salva Duran-Nebreda

The aim of this thesis is to question some of the basic assumptions that go into building the $\Lambda$CDM model of our universe. The assumptions we focus on are the initial conditions of the universe, the fundamental forces in the universe…

宇宙学与河外天体物理 · 物理学 2020-06-25 Darsh Kodwani

It has been proposed that during the early steps in the origin of life, small droplets could have formed via the segregation of molecules from complex mixtures by phase separation. These droplets could have provided chemical reaction…

生物物理 · 物理学 2017-04-26 David Zwicker , Rabea Seyboldt , Christoph A. Weber , Anthony A. Hyman , Frank Jülicher

Lateral organization in the plane of the plasma membrane is an important driver of biological processes. The past dozen years have seen increasing experimental support for the notion that lipid organization plays an important role in…

生物物理 · 物理学 2020-09-03 Thomas R. Shaw , Subhadip Ghosh , Sarah L. Veatch

Molecular biology is a nanotechnology that works--it has worked for billions of years and in an amazing variety of circumstances. At its core is a system for acquiring, processing and communicating information that is universal, from…

基因组学 · 定量生物学 2016-12-21 Apoorva D. Patel

Cells are defined by lipid membranes that differ in their structure across the tree of life. While the membranes of most bacteria and eukaryotes consist of single-headed bilayer lipids, the membranes of archaea are composed of mixtures of…

软凝聚态物质 · 物理学 2026-04-21 Felix Frey , Miguel Amaral , Anđela Šarić
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