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We present a simple model for biological aging. We studied it through computer simulations and we have found this model to reflect some features of real populations.

凝聚态物理 · 物理学 2009-10-28 Thadeu J. P. Penna

The bit-string model of biological aging is used to simulate the catastrophic senescence of Pacific Salmon. We have shown that reproduction occuring only once and at a fixed age is the only ingredient needed to explain the catastrophic…

adap-org · 物理学 2009-10-28 T. J. P. Penna , S. Moss de Oliveira , Dietrich Stauffer

A bit-string model of biological life-histories is parallelized, with hundreds of millions of individuals. It gives the desired drastic decay of survival probabilities with increasing age for 32 age intervals.

凝聚态物理 · 物理学 2015-06-25 T. J. P. Penna , D. Stauffer

We introduce a population dynamics model, where individual genomes are represented by bit-strings. Selection is described by death probabilities which depend on these genomes, and new individuals continuously replace the ones that die,…

统计力学 · 物理学 2009-11-10 P. M. C. de Oliveira , J. S. Sa' Martins , D. Stauffer , S. Moss de Oliveira

We present a model for biological aging that considers the number of individuals whose (inherited) genetic charge determines the maximum age for death: each individual may die before that age due to some external factor, but never after…

adap-org · 物理学 2008-02-03 R. M. C. de Almeida , S. Moss de Oliveira , T. J. P. Penna

In this work we check the occurrence of the Azbel assumption of mortality within the framework of a bit string model for biological ageing. We reproduced the observed feature of linear correspondence between the fitting parameters of the…

adap-org · 物理学 2008-02-03 A. Racco , M. Argollo de Menezes , T. J. P. Penna

We removed from the Penna model for biological ageing any random killing Verhulst factor. Deaths are due only to genetic diseases and the population size is fixed, instead of fluctuating around some constant value. We show that these…

统计力学 · 物理学 2007-05-23 S. Moss de Oliveira , P. M. C de Oliveira , J. S. Sa Martins

We represent a process of learning by using bit strings, where 1-bits represent the knowledge acquired by individuals. Two ways of learning are considered: individual learning by trial-and-error; and social learning by copying knowledge…

种群与进化 · 定量生物学 2007-05-23 Armando Ticona Bustillos , Paulo Murilo C. de Oliveira

A bit-string model for the evolution of a population of haploid organisms, subject to competition, reproduction with mutation and selection is studied, using mean field theory and Monte Carlo simulations. We show that, depending on…

统计力学 · 物理学 2009-11-07 Kathia M. Fehsenfeld , Ronald Dickman , Americo T. Bernardes

We generalize the standard Penna bit-string model of biological ageing by assuming that each deleterious mutation diminishes the survival probability in every time interval by a small percentage. This effect is added to the usual lethal but…

统计力学 · 物理学 2015-06-24 J. S. Sá Martins , D. Stauffer

We have analyzed the relations between the mutational pressure, recombination and selection pressure in the bit-string model with sexual reproduction. For specific sets of these parameters we have found three phase transitions with one…

种群与进化 · 定量生物学 2007-05-23 D. Stauffer , S. Cebrat

In this paper the Penna model is reconsidered. With computer simulations we check how the control parameters of the model influence the size of the stable population.

种群与进化 · 定量生物学 2007-05-23 K. Malarz , M. Sitarz , P. Gronek , A. Dydejczyk

A stochastic genetic model for biological aging is introduced bridging the gap between the bit-string Penna model and the Pletcher-Neuhauser approach. The phenomenon of exponentially increasing mortality function at intermediate ages and…

统计力学 · 物理学 2007-05-23 Zhi-Feng Huang , Dietrich Stauffer

The probability of the survival of the population of individuals of both sexes of given mature age, procreation rate and structure stability has been searched in the numerical experiment. The populations with long period of reproduction and…

凝聚态物理 · 物理学 2007-05-23 Kazimierz Pater

The standard Penna ageing model with sexual reproduction is enlarged by adding additional bit-strings for love: Marriage happens only if the male love strings are sufficiently different from the female ones. We simulate at what level of…

种群与进化 · 定量生物学 2015-05-19 D. Stauffer , S. Cebrat , T. J. P. Penna , A. O. Sousa

The Penna model is a strategy to simulate the genetic dynamics of age-structured populations, in which the individuals genomes are represented by bit-strings. It provides a simple metaphor for the evolutionary process in terms of the…

种群与进化 · 定量生物学 2009-11-11 Veit Schwämmle , Suzana M. de Oliveira

A formulation of bit-string models of language evolution, based on differential equations for the population speaking each language, is introduced and preliminarily studied. Connections with replicator dynamics and diffusion processes are…

物理与社会 · 物理学 2009-11-13 Damian H. Zanette

The Penna bit-string model successfully encompasses many phenomena of population evolution, including inheritance, mutation, evolution and ageing. If we consider social interactions among individuals in the Penna model, the population will…

无序系统与神经网络 · 物理学 2009-11-11 Chunguang Li , Philip K. Maini

In an extant population, how much information do extant individuals provide on the pedigree of their ancestors? Recent work by Kim, Mossel, Ramnarayan and Turner (2020) studied this question under a number of simplifying assumptions,…

种群与进化 · 定量生物学 2022-11-29 Elchanan Mossel , David Vulakh

We study the effects of interspecific correlations in a biological coevolution model in which organisms are represented by genomes of bitstrings. We present preliminary results for this model, indicating that these correlations do not…

种群与进化 · 定量生物学 2007-05-23 Volkan Sevim , Per Arne Rikvold
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