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Antimicrobial resistance (AMR) poses a mounting global health crisis, requiring rapid and reliable prediction frameworks that capture its complex evolutionary dynamics. Traditional antimicrobial susceptibility testing (AST), while accurate,…

种群与进化 · 定量生物学 2025-11-18 Anshul Bagaria

Whole genome sequencing (WGS) is quickly becoming the customary means for identification of antimicrobial resistance (AMR) due to its ability to obtain high resolution information about the genes and mechanisms that are causing resistance…

基因组学 · 定量生物学 2021-07-27 Mattia Prosperi , Simone Marini , Christina Boucher , Jiang Bian

Antimicrobial resistance is an important public health concern that has implications in the practice of medicine worldwide. Accurately predicting resistance phenotypes from genome sequences shows great promise in promoting better use of…

Antimicrobial resistance (AMR) is a risk for patients and a burden for the healthcare system. However, AMR assays typically take several days. This study develops predictive models for AMR based on easily available clinical and…

Antimicrobial Resistance (AMR) is a rapidly escalating global health crisis. While genomic sequencing enables rapid prediction of resistance phenotypes, current computational methods have limitations. Standard machine learning models treat…

机器学习 · 计算机科学 2025-09-30 Md. Saiful Bari Siddiqui , Nowshin Tarannum

Can we understand and predict the evolutionary pathways by which bacteria acquire multi-drug resistance (MDR)? These questions have substantial potential impact in basic biology and in applied approaches to address the global health…

Antimicrobial resistance (AMR) poses a significant threat to public health by increasing mortality, extending hospital stays, and increasing healthcare costs. It affects people of all ages and affects health services, veterinary medicine,…

Antibiotic Resistance (AR) is a critical global health challenge that necessitates the development of cost-effective, efficient, and accurate diagnostic tools. Given the genetic basis of AR, techniques such as Polymerase Chain Reaction…

定量方法 · 定量生物学 2025-02-24 David Hagerman , Anna Johnning , Roman Naeem , Fredrik Kahl , Erik Kristiansson , Lennart Svensson

Antimicrobial resistance (AMR) poses a significant public health and economic challenge, increasing treatment costs and reducing antibiotic effectiveness. This study employs machine learning to analyze genomic and epidemiological data from…

定量方法 · 定量生物学 2025-09-05 Shubham Mishra , The Anh Han , Bruno Silvester Lopes , Shatha Ghareeb , Zia Ush Shamszaman

Antimicrobial resistance (AMR) is a growing global crisis projected to cause 10 million deaths per year by 2050. While the WHO Global Antimicrobial Resistance and Use Surveillance System (GLASS) provides standardized surveillance data…

机器学习 · 计算机科学 2026-02-27 Md Tanvir Hasan Turja

Background: Antimicrobial resistance (AMR) is a major global public health problem, contributing to an estimated 4.95 million deaths in 2019 and projected to cause up to 10 million deaths annually and 100 trillion dollars in cumulative…

种群与进化 · 定量生物学 2026-01-06 Felipe Schardong , Claudio Jose Struchiner , Luiz Max Carvalho

Antimicrobial resistance (AMR) is escalating and outpacing current antibiotic development. Thus, discovering antibiotics effective against emerging pathogens is becoming increasingly critical. However, existing approaches cannot rapidly…

机器学习 · 计算机科学 2025-07-11 Tianang Leng , Fangping Wan , Marcelo Der Torossian Torres , Cesar de la Fuente-Nunez

Antimicrobial resistance to drugs (AMR), a global threat to human and animal health, is often regarded as resulting from cooperative behaviour. Moreover, microbes generally evolve in volatile environments that, together with demographic…

种群与进化 · 定量生物学 2024-06-18 Lluís Hernández-Navarro , Matthew Asker , Mauro Mobilia

Antimicrobial-resistant (AMR) microbes are a growing challenge in healthcare, rendering modern medicines ineffective. AMR arises from antibiotic production and bacterial evolution, but quantifying its transmission remains difficult. With…

机器学习 · 计算机科学 2025-02-04 Qian Fu , Yuzhe Zhang , Yanfeng Shu , Ming Ding , Lina Yao , Chen Wang

The rise of Antimicrobial Resistance, particularly Multi-Drug Resistance (MDR), presents a critical challenge for clinical decision-making due to limited treatment options and delays in conventional susceptibility testing. This study…

机器学习 · 计算机科学 2026-03-03 Santanam Wishal , Riad Sahara

Accelerated Cardiovascular Magnetic Resonance (CMR) image reconstruction remains a critical challenge due to the trade-off between scan time and image quality, particularly when generalizing across diverse acquisition settings. We propose…

图像与视频处理 · 电气工程与系统科学 2025-10-30 Kian Anvari Hamedani , Narges Razizadeh , Shahabedin Nabavi , Mohsen Ebrahimi Moghaddam

Antibiotic resistance poses a significant threat in in-patient settings with high mortality. Using MIMIC-III data, we generated Sentence-BERT embeddings from clinical notes and applied Neural Networks and XGBoost to predict antibiotic…

Robust generalization under distribution shift remains difficult to monitor and optimize in the absence of target-domain labels, as models with similar in-distribution accuracy can exhibit markedly different out-of-distribution (OOD)…

机器学习 · 计算机科学 2026-02-06 Ali Zia , Farid Hazratian

Autoregressive language models (ARMs) suffer from the reversal curse: after learning ''$A$ is $B$,'' they often fail on the reverse query ''$B$ is $A$.'' Masked diffusion language models (MDMs) exhibit this failure in a much weaker form,…

人工智能 · 计算机科学 2026-05-13 Moongyu Jeon , Sangwoo Shin , BumJun Kim , Kyelim Lee , Albert No

Generalization, the ability to perform well beyond the training context, is a hallmark of biological and artificial intelligence, yet anticipating unseen failures remains a central challenge. Conventional approaches often take a…

机器学习 · 计算机科学 2026-03-03 Chi-Ning Chou , Artem Kirsanov , Yao-Yuan Yang , SueYeon Chung
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