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We present a weakly supervised deep learning method to perform instance segmentation of cells present in microscopy images. Annotation of biomedical images in the lab can be scarce, incomplete, and inaccurate. This is of concern when…

计算机视觉与模式识别 · 计算机科学 2019-08-28 Fidel A. Guerrero-Peña , Pedro D. Marrero Fernandez , Tsang Ing Ren , Alexandre Cunha

We show that the way inference is performed in few-shot segmentation tasks has a substantial effect on performances -- an aspect often overlooked in the literature in favor of the meta-learning paradigm. We introduce a transductive…

计算机视觉与模式识别 · 计算机科学 2021-03-31 Malik Boudiaf , Hoel Kervadec , Ziko Imtiaz Masud , Pablo Piantanida , Ismail Ben Ayed , Jose Dolz

Data rebalancing techniques, including oversampling and undersampling, are a common approach to addressing the challenges of imbalanced data. To tackle unresolved problems related to both oversampling and undersampling, we propose a new…

机器学习 · 计算机科学 2025-07-11 Karen Medlin , Sven Leyffer , Krishnan Raghavan

Supervised contrastive learning (SupCon) has proven to be a powerful alternative to the standard cross-entropy loss for classification of multi-class balanced datasets. However, it struggles to learn well-conditioned representations of…

机器学习 · 计算机科学 2025-03-24 David Mildenberger , Paul Hager , Daniel Rueckert , Martin J Menten

Foreground-background separation is an important problem in document image analysis. Popular unsupervised binarization methods (such as the Sauvola's algorithm) employ adaptive thresholding to classify pixels as foreground or background. In…

计算机视觉与模式识别 · 计算机科学 2022-04-11 Soumyadeep Dey , Pratik Jawanpuria

Weak-strong consistency learning strategies are widely employed in semi-supervised medical image segmentation to train models by leveraging limited labeled data and enforcing weak-to-strong consistency. However, existing methods primarily…

计算机视觉与模式识别 · 计算机科学 2025-11-04 Chaowei Chen , Xiang Zhang , Honglie Guo , Shunfang Wang

Uncertainty in medical image segmentation is inherently non-uniform, with boundary regions exhibiting substantially higher ambiguity than interior areas. Conventional training treats all pixels equally, leading to unstable optimization…

计算机视觉与模式识别 · 计算机科学 2026-02-25 Jinming Zhang , Youpeng Yang , Xi Yang , Haosen Shi , Yuyao Yan , Qiufeng Wang , Guangliang Cheng , Kaizhu Huang

Trained using only image class label, deep weakly supervised methods allow image classification and ROI segmentation for interpretability. Despite their success on natural images, they face several challenges over histology data where ROI…

图像与视频处理 · 电气工程与系统科学 2022-05-13 Soufiane Belharbi , Jérôme Rony , Jose Dolz , Ismail Ben Ayed , Luke McCaffrey , Eric Granger

Class imbalance poses a significant challenge to supervised classification, particularly in critical domains like medical diagnostics and anomaly detection where minority class instances are rare. While numerous studies have explored…

机器学习 · 计算机科学 2025-09-10 Ali Nawaz , Amir Ahmad , Shehroz S. Khan

We show that established performance metrics in binary classification, such as the F-score, the Jaccard similarity coefficient or Matthews' correlation coefficient (MCC), are not robust to class imbalance in the sense that if the proportion…

机器学习 · 统计学 2024-04-12 Hajo Holzmann , Bernhard Klar

Automated red blood cell (RBC) classification on blood smear images helps hematologists to analyze RBC lab results in a reduced time and cost. However, overlapping cells can cause incorrect predicted results, and so they have to be…

图像与视频处理 · 电气工程与系统科学 2024-10-30 Korranat Naruenatthanaset , Thanarat H. Chalidabhongse , Duangdao Palasuwan , Nantheera Anantrasirichai , Attakorn Palasuwan

Data imbalance between common and rare diseases during model training often causes intelligent diagnosis systems to have biased predictions towards common diseases. The state-of-the-art approaches apply a two-stage learning framework to…

计算机视觉与模式识别 · 计算机科学 2022-07-15 Chenghua Zeng , Huijuan Lu , Kanghao Chen , Ruixuan Wang , Wei-Shi Zheng

Edge detection (ED) remains a fundamental task in computer vision, yet its performance is often hindered by the ambiguous nature of non-edge pixels near object boundaries. The widely adopted Weighted Binary Cross-Entropy (WBCE) loss treats…

计算机视觉与模式识别 · 计算机科学 2025-07-10 Hao Shu

Object segmentation plays an important role in the modern medical image analysis, which benefits clinical study, disease diagnosis, and surgery planning. Given the various modalities of medical images, the automated or semi-automated…

图像与视频处理 · 电气工程与系统科学 2020-06-01 Dong Yang , Holger Roth , Xiaosong Wang , Ziyue Xu , Andriy Myronenko , Daguang Xu

Deep learning (DL) methods for white matter lesion (WML) segmentation in MRI suffer a reduction in performance when applied on data from a scanner or centre that is out-of-distribution (OOD) from the training data. This is critical for…

图像与视频处理 · 电气工程与系统科学 2023-07-11 Abdollah Ghazvanchahi , Pejman Jahbedar Maralani , Alan R. Moody , April Khademi

Class imbalance significantly degrades classification performance, yet its effects are rarely analyzed from a unified theoretical perspective. We propose a principled framework based on three fundamental scales: the imbalance coefficient…

机器学习 · 统计学 2026-01-08 Rose Yvette Bandolo Essomba , Ernest Fokoué

Classification imbalance arises when one class is much rarer than the other. We frame this setting as transfer learning under label (prior) shift between an imbalanced source distribution induced by the observed data and a balanced target…

机器学习 · 统计学 2026-01-16 Eric Xia , Jason M. Klusowski

Accurate stroke lesion segmentation plays a pivotal role in stroke rehabilitation research, to provide lesion shape and size information which can be used for quantification of the extent of the stroke and to assess treatment efficacy.…

图像与视频处理 · 电气工程与系统科学 2022-11-29 Jiayu Huo , Liyun Chen , Yang Liu , Maxence Boels , Alejandro Granados , Sebastien Ourselin , Rachel Sparks

Segmentation tasks in medical imaging are inherently ambiguous: the boundary of a target structure is oftentimes unclear due to image quality and biological factors. As such, predicted segmentations from deep learning algorithms are…

图像与视频处理 · 电气工程与系统科学 2019-11-18 Katharina Hoebel , Ken Chang , Jay Patel , Praveer Singh , Jayashree Kalpathy-Cramer

Annotating medical images demands significant time and expertise, often requiring pathologists to invest hundreds of hours in labeling mammary epithelial nuclei datasets. We address this critical challenge by achieving 95.5% Dice score…

人工智能 · 计算机科学 2025-12-03 Varun Kumar Dasoju , Qingsu Cheng , Zeyun Yu