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Viral signal in wastewater offers a promising opportunity to assess and predict the burden of infectious diseases. That has driven the widespread adoption and development of wastewater monitoring tools by public health organizations. Recent…

统计方法学 · 统计学 2024-10-11 K. Ken Peng , Charmaine B. Dean , Robert Delatolla , X. Joan Hu

Wastewater based epidemiology is recognized as one of the monitoring pillars, providing essential information for pandemic management. Central in the methodology are data modelling concepts for both communicating the monitoring results but…

应用统计 · 统计学 2022-08-30 Wolfgang Rauch , Hannes Schenk , Heribert Insam , Rudolf Markt , Norbert Kreuzinger

Wastewater data can be very useful for epidemic control during a disease outbreak and proper synthesis of different sources of information can be integrated towards an alerting system, that can be used for decision support. Wastewater data…

Monitoring wastewater concentrations of SARS-CoV-2 yields a low-cost, noninvasive method for tracking disease prevalence and provides early warning signs of upcoming outbreaks in the serviced communities. There is tremendous clinical and…

The outburst of COVID-19 in late 2019 was the start of a health crisis that shook the world and took millions of lives in the ensuing years. Many governments and health officials failed to arrest the rapid circulation of infection in their…

机器学习 · 计算机科学 2022-12-20 Mehrdad Fazli , Heman Shakeri

The pandemic of COVID-19 has imposed tremendous pressure on public health systems and social economic ecosystems over the past years. To alleviate its social impact, it is important to proactively track the prevalence of COVID-19 within…

As COVID-19 transitions into an endemic disease that remains constantly present in the population at a stable level, monitoring its prevalence without invasive measures becomes increasingly important. In this paper, we present a deep neural…

定量方法 · 定量生物学 2025-12-02 Yifei Chen , Eric Liang

In the case of SARS-CoV-2 pandemic management, wastewater-based epidemiology aims to derive information on the infection dynamics by monitoring virus concentrations in the wastewater. However, due to the intrinsic random fluctuations of the…

Epidemic models are invaluable tools to understand and implement strategies to control the spread of infectious diseases, as well as to inform public health policies and resource allocation. However, current modeling approaches have…

统计方法学 · 统计学 2026-05-12 Caitlin Ward , Rob Deardon , Alexandra M. Schmidt

Using the classical Susceptible-Infected-Recovered epidemiological model, an analytical formula is derived for the number of beds occupied by Covid-19 patients. The analytical curve is fitted to data in Belgium, France, New York City and…

种群与进化 · 定量生物学 2021-02-22 Gregory Kozyreff

Wastewater-based epidemiology (WBE) is an effective tool for tracking community circulation of respiratory viruses. We address estimating the effective reproduction number ($R_t$) and the relative number of infections from wastewater viral…

Infectious disease dynamics operate across multiple biological scales, with within-host viral dynamics being a key driver of between-host transmission. However, while models that explicitly link these scales exist, none have been developed…

应用统计 · 统计学 2026-04-23 Dylan J. Morris , Lauren Kennedy , Andrew J. Black

Over the course of the COVID-19 pandemic, Generalised Additive Models (GAMs) have been successfully employed on numerous occasions to obtain vital data-driven insights. In this paper we further substantiate the success story of GAMs,…

We propose a novel model-based clustering approach for samples of time series. We assume as a unique commonality that two observations belong to the same group if structural changes in their behaviours happen at the same time. We resort to…

统计方法学 · 统计学 2024-10-15 Riccardo Corradin , Luca Danese , Wasiur R. KhudaBukhsh , Andrea Ongaro

Understanding the spatio-temporal patterns of the coronavirus disease 2019 (COVID-19) is essential to construct public health interventions. Spatially referenced data can provide richer opportunities to understand the mechanism of the…

统计方法学 · 统计学 2022-07-15 Jaewoo Park , Seorim Yi , Won Chang , Jorge Mateu

Phenomenological and deterministic models are often used for the estimation of transmission parameters in an epidemic and for the prediction of its growth trajectory. Such analyses are usually based on single peak outbreak dynamics. In…

种群与进化 · 定量生物学 2022-01-20 D. P. Mahapatra , S. Triambak

Individuals infected with SARS-CoV-2, the virus that causes COVID-19, may shed the virus in stool before developing symptoms, suggesting that measurements of SARS-CoV-2 concentrations in wastewater could be a "leading indicator" of COVID-19…

其他定量生物学 · 定量生物学 2021-06-25 Scott W. Olesen , Maxim Imakaev , Claire Duvallet

This paper addresses statistical modelling and forecasting of key indicators describing the severity of a developing pandemic, using routinely reported daily counts of infections, hospitalizations, deaths (both in and out of hospital), and…

The aim of the paper is to describe two models of Covid-19 infection dynamics. For this purpose a special class of branching processes with two types of individuals is considered. These models are intended to use only the observed daily…

种群与进化 · 定量生物学 2020-05-05 Nikolay M. Yanev , Vessela K. Stoimenova , Dimitar V. Atanasov

COVID-19 has resulted in a public health global crisis. The pandemic control necessitates epidemic models that capture the trends and impacts on infectious individuals. Many exciting models can implement this but they lack practical…

计算机与社会 · 计算机科学 2021-04-13 Ou Deng , Kiichi Tago , Qun Jin
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