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相关论文: Evaluating protein binding interfaces with PUMBA

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Recently the state space models (SSMs) with efficient hardware-aware designs, i.e., the Mamba deep learning model, have shown great potential for long sequence modeling. Meanwhile building efficient and generic vision backbones purely upon…

计算机视觉与模式识别 · 计算机科学 2024-11-15 Lianghui Zhu , Bencheng Liao , Qian Zhang , Xinlong Wang , Wenyu Liu , Xinggang Wang

Survival analysis using whole-slide images (WSIs) is crucial in cancer research. Despite significant successes, pathology images typically only provide slide-level labels, which hinders the learning of discriminative representations from…

计算机视觉与模式识别 · 计算机科学 2025-09-23 Chengsheng Zhang , Linhao Qu , Xiaoyu Liu , Zhijian Song

The protein-protein interactions (PPIs) are crucial for understanding the majority of cellular processes. PPIs play important role in gene transcription regulation, cellular signaling, molecular basis of immune response and more. Moreover,…

生物大分子 · 定量生物学 2016-05-31 Maciej Pawel Ciemny , Mateusz Kurcinski , Andrzej Kolinski , Sebastian Kmiecik

Information on protein-protein interactions (PPIs) not only advances our understanding of molecular biology but also provides important clues for target selection in drug discovery and the design of PPI inhibitors. One of the techniques…

生物大分子 · 定量生物学 2021-05-11 Masahito Ohue , Yutaka Akiyama

In the realm of computer graphics, the ability to learn continuously from non-stationary data streams while adapting to new visual patterns and mitigating catastrophic forgetting is of paramount importance. Existing approaches often…

图形学 · 计算机科学 2025-04-01 Jiahao Qin , Feng Liu , Lu Zong

Aside from regular beamline experiments at light sources, the preparation steps before these experiments are also worth systematic consideration in terms of automation; a representative category in these steps is attitude tuning, which…

仪器与探测器 · 物理学 2024-11-06 Peng-Cheng Li , Xiao-Xue Bi , Zhen Zhang , Xiao-Bao Deng , Chun Li , Li-Wen Wang , Gong-Fa Liu , Yi Zhang , Ai-Yu Zhou , Yu Liu

Remote sensing image classification forms the foundation of various understanding tasks, serving a crucial function in remote sensing image interpretation. The recent advancements of Convolutional Neural Networks (CNNs) and Transformers…

计算机视觉与模式识别 · 计算机科学 2024-03-29 Keyan Chen , Bowen Chen , Chenyang Liu , Wenyuan Li , Zhengxia Zou , Zhenwei Shi

Despite recent advances in protein-ligand structure prediction, deep learning methods remain limited in their ability to accurately predict binding affinities, particularly for novel protein targets dissimilar from the training set. In…

定量方法 · 定量生物学 2025-12-04 Michael Brocidiacono , James Wellnitz , Konstantin I. Popov , Alexander Tropsha

Traditionally for improving the segmentation performance of models, most approaches prefer to use adding more complex modules. And this is not suitable for the medical field, especially for mobile medical devices, where computationally…

图像与视频处理 · 电气工程与系统科学 2025-06-30 Renkai Wu , Yinghao Liu , Pengchen Liang , Qing Chang

Robust feature representations are essential for learning-based Multi-View Stereo (MVS), which relies on accurate feature matching. Recent MVS methods leverage Transformers to capture long-range dependencies based on local features…

计算机视觉与模式识别 · 计算机科学 2025-11-04 Jianfei Jiang , Qiankun Liu , Hongyuan Liu , Haochen Yu , Liyong Wang , Jiansheng Chen , Huimin Ma

Beta-turn prediction is useful in protein function studies and experimental design. Although recent approaches using machine-learning techniques such as SVM, neural networks, and K-NN have achieved good results for beta-turn pre-diction,…

生物大分子 · 定量生物学 2018-08-14 Chao Fang , Yi Shang , Dong Xu

Efficient encoding and representation of large 3D molecular structures with high fidelity is critical for biomolecular design applications. Despite this, many representation learning approaches restrict themselves to modeling smaller…

机器学习 · 计算机科学 2025-04-10 Andrew Liu , Axel Elaldi , Nathan Russell , Olivia Viessmann

Deep learning models like Convolutional Neural Networks and transformers have shown impressive capabilities in speech verification, gaining considerable attention in the research community. However, CNN-based approaches struggle with…

音频与语音处理 · 电气工程与系统科学 2024-12-17 Yang Liu , Li Wan , Yiteng Huang , Ming Sun , Yangyang Shi , Florian Metze

Despite the growing interest in Mamba architecture as a potential replacement for Transformer architecture, parameter-efficient fine-tuning (PEFT) approaches for Mamba remain largely unexplored. In our study, we introduce two key…

机器学习 · 计算机科学 2025-03-25 Seokil Ham , Hee-Seon Kim , Sangmin Woo , Changick Kim

Single-modal object detection tasks often experience performance degradation when encountering diverse scenarios. In contrast, multimodal object detection tasks can offer more comprehensive information about object features by integrating…

计算机视觉与模式识别 · 计算机科学 2024-12-25 Chang Liu , Xin Ma , Xiaochen Yang , Yuxiang Zhang , Yanni Dong

Convolutional neural networks (CNNs) and Transformers have shown advanced accuracy in crack detection under certain conditions. Yet, the fixed local attention can compromise the generalisation of CNNs, and the quadratic complexity of the…

计算机视觉与模式识别 · 计算机科学 2024-06-25 Zhaohui Chen , Elyas Asadi Shamsabadi , Sheng Jiang , Luming Shen , Daniel Dias-da-Costa

Recently, state space models (SSM), particularly Mamba, have attracted significant attention from scholars due to their ability to effectively balance computational efficiency and performance. However, most existing visual Mamba methods…

计算机视觉与模式识别 · 计算机科学 2025-04-09 Leiye Liu , Miao Zhang , Jihao Yin , Tingwei Liu , Wei Ji , Yongri Piao , Huchuan Lu

Remote sensing image fusion aims to generate a high-resolution multi/hyper-spectral image by combining a high-resolution image with limited spectral data and a low-resolution image rich in spectral information. Current deep learning (DL)…

计算机视觉与模式识别 · 计算机科学 2024-11-19 Siran Peng , Xiangyu Zhu , Haoyu Deng , Liang-Jian Deng , Zhen Lei

Transformers have demonstrated impressive results for 3D point cloud semantic segmentation. However, the quadratic complexity of transformer makes computation costs high, limiting the number of points that can be processed simultaneously…

计算机视觉与模式识别 · 计算机科学 2025-01-14 Zhuoyuan Li , Yubo Ai , Jiahao Lu , ChuXin Wang , Jiacheng Deng , Hanzhi Chang , Yanzhe Liang , Wenfei Yang , Shifeng Zhang , Tianzhu Zhang

Semantic segmentation is a vital task in the field of remote sensing (RS). However, conventional convolutional neural network (CNN) and transformer-based models face limitations in capturing long-range dependencies or are often…

计算机视觉与模式识别 · 计算机科学 2024-09-11 Yin Hu , Xianping Ma , Jialu Sui , Man-On Pun