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The goal of these lectures is to review some mathematical aspects of random tree models used in evolutionary biology to model gene trees or species trees. We start with stochastic models of tree shapes (finite trees without edge lengths),…

概率论 · 数学 2017-08-30 Amaury Lambert

The problem of learning forest-structured discrete graphical models from i.i.d. samples is considered. An algorithm based on pruning of the Chow-Liu tree through adaptive thresholding is proposed. It is shown that this algorithm is both…

信息论 · 计算机科学 2011-02-15 Vincent Y. F. Tan , Animashree Anandkumar , Alan S. Willsky

Phylogenetic trees are widely used to understand the evolutionary history of organisms. Tree shapes provide information about macroevolutionary processes. However, macroevolutionary models are unreliable for inferring the true processes…

种群与进化 · 定量生物学 2021-10-11 Albert Ch. Soewongsono , Barbara R. Holland , Małgorzata M. O'Reilly

The benefits of diversifying risks are difficult to estimate quantitatively because of the uncertainties in the dependence structure between the risks. Also, the modelling of multidimensional dependencies is a non-trivial task. This paper…

风险管理 · 定量金融 2011-11-11 Jean-Philippe Bruneton

Survival time prediction from medical images is important for treatment planning, where accurate estimations can improve healthcare quality. One issue affecting the training of survival models is censored data. Most of the current survival…

计算机视觉与模式识别 · 计算机科学 2022-05-27 Renato Hermoza , Gabriel Maicas , Jacinto C. Nascimento , Gustavo Carneiro

The varying-coefficient model is a strong tool for the modelling of interactions in generalized regression. It is easy to apply if both the variables that are modified as well as the effect modifiers are known. However, in general one has a…

统计方法学 · 统计学 2017-05-25 Moritz Berger , Gerhard Tutz , Matthias Schmid

Finding parametric models that accurately describe the dependence structure of observed data is a central task in the analysis of time series. Classical frequency domain methods provide a popular set of tools for fitting and diagnostics of…

统计方法学 · 统计学 2019-01-18 Stefan Birr , Tobias Kley , Stanislav Volgushev

In statistics permutations typically arise in the context of rank plots for two-dimensional data. Such plots can also be interpreted as discrete copulas. In discrete mathematics, typically in the context of the description of large…

统计理论 · 数学 2026-05-14 L. Baringhaus , R. Grübel

The paper presents a new copula based method for measuring dependence between random variables. Our approach extends the Maximum Mean Discrepancy to the copula of the joint distribution. We prove that this approach has several advantageous…

机器学习 · 计算机科学 2019-08-15 Barnabas Poczos , Zoubin Ghahramani , Jeff Schneider

Assume we are given a set of items from a general metric space, but we neither have access to the representation of the data nor to the distances between data points. Instead, suppose that we can actively choose a triplet of items (A,B,C)…

机器学习 · 统计学 2018-06-19 Siavash Haghiri , Damien Garreau , Ulrike von Luxburg

Kernel survival analysis models estimate individual survival distributions with the help of a kernel function, which measures the similarity between any two data points. Such a kernel function can be learned using deep kernel survival…

机器学习 · 计算机科学 2025-02-18 George H. Chen

In many statistical applications, the dimension is too large to handle for standard high-dimensional machine learning procedures. This is particularly true for graphical models, where the interpretation of a large graph is difficult and…

统计理论 · 数学 2024-05-20 Luc Devroye , Gábor Lugosi , Piotr Zwiernik

This paper studies the degree to which a bivariate copula fails to be symmetric under coordinate permutation, a property known as non-exchangeability. Working within an axiomatic framework that quantifies this asymmetry through a family of…

统计理论 · 数学 2026-04-13 Manuel Úbeda-Flores

The use of cumulative incidence functions for characterizing the risk of one type of event in the presence of others has become increasingly popular over the past decade. The problems of modeling, estimation and inference have been treated…

统计方法学 · 统计学 2021-06-25 Youngjoo Cho , Annette M. Molinaro , Chen Hu , Robert L. Strawderman

Dependence strucuture estimation is one of the important problems in machine learning domain and has many applications in different scientific areas. In this paper, a theoretical framework for such estimation based on copula and copula…

机器学习 · 计算机科学 2019-09-11 Jian Ma , Zengqi Sun

We present a general approach to constructing permutation tests that are both exact for the null hypothesis of equality of distributions and asymptotically correct for testing equality of parameters of distributions while allowing the…

统计理论 · 数学 2021-07-12 Colin B. Fogarty

In this article, a copula-based method for mixed regression models is proposed, where the conditional distribution of the response variable, given covariates, is modelled by a parametric family of continuous or discrete distributions, and…

统计方法学 · 统计学 2025-01-13 Pavel Krupskii , Bouchra R Nasri , Bruno N Remillard

A core step of every algorithm for learning regression trees is the selection of the best splitting variable from the available covariates and the corresponding split point. Early tree algorithms (e.g., AID, CART) employed greedy search…

统计方法学 · 统计学 2019-06-26 Lisa Schlosser , Torsten Hothorn , Achim Zeileis

We develop a new statistical procedure to test whether the dependence structure is identical between two groups. Rather than relying on a single index such as Pearson's correlation coefficient or Kendall's Tau, we consider the entire…

计量经济学 · 经济学 2018-11-07 Juwon Seo

Massive sized survival datasets are becoming increasingly prevalent with the development of the healthcare industry. Such datasets pose computational challenges unprecedented in traditional survival analysis use-cases. A popular way for…

统计方法学 · 统计学 2023-05-09 Nir Keret , Malka Gorfine