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Side-channel attacks exploit unintended information leakage from system behavior and continue to pose serious privacy risks in modern platforms. Despite extensive prior work, side-channel analysis remains largely manual and fragmented,…

密码学与安全 · 计算机科学 2026-05-19 Zhen Xu , Zihao Wang , Yuhua Sun , XiaoFeng Wang

The unstructured nature of clinical notes within electronic health records often conceals vital patient-related information, making it challenging to access or interpret. To uncover this hidden information, specialized Natural Language…

Large Language Models (LLMs) based agents are transforming the programming language landscape by facilitating learning for beginners, enabling code generation, and optimizing documentation workflows. Hardware Description Languages (HDLs),…

硬件体系结构 · 计算机科学 2025-01-03 Mark Zakharov , Farzaneh Rabiei Kashanaki , Jose Renau

Recent advancements in large language models (LLMs) have led to the creation of intelligent agents capable of performing complex tasks. This paper introduces a novel LLM-based multimodal agent framework designed to operate smartphone…

计算机视觉与模式识别 · 计算机科学 2023-12-25 Chi Zhang , Zhao Yang , Jiaxuan Liu , Yucheng Han , Xin Chen , Zebiao Huang , Bin Fu , Gang Yu

Accurate cell type annotation across datasets is a key challenge in single-cell analysis. snRNA-seq enables profiling of frozen or difficult-to-dissociate tissues, complementing scRNA-seq by capturing fragile or rare cell types. However,…

基因组学 · 定量生物学 2026-03-10 Xiran Chen , Quan Zou , Qinyu Cai , Xiaofeng Chen , Weikai Li , Yansu Wang

Existing large language model (LLM) agents for automating data science show promise, but they remain constrained by narrow task scopes, limited generalization across tasks and models, and over-reliance on state-of-the-art (SOTA) LLMs. We…

计算与语言 · 计算机科学 2025-10-06 Ziming You , Yumiao Zhang , Dexuan Xu , Yiwei Lou , Yandong Yan , Wei Wang , Huaming Zhang , Yu Huang

Large language models (LLMs) can label data faster and cheaper than humans for various NLP tasks. Despite their prowess, LLMs may fall short in understanding of complex, sociocultural, or domain-specific context, potentially leading to…

计算与语言 · 计算机科学 2024-02-29 Hannah Kim , Kushan Mitra , Rafael Li Chen , Sajjadur Rahman , Dan Zhang

Lesion detection is an important problem within medical imaging analysis. Most previous work focuses on detecting and segmenting a specialized category of lesions (e.g., lung nodules). However, in clinical practice, radiologists are…

计算机视觉与模式识别 · 计算机科学 2020-05-29 Ke Yan , Jinzheng Cai , Adam P. Harrison , Dakai Jin , Jing Xiao , Le Lu

Medical Large Vision-Language Models (Med-LVLMs) have been widely adopted for medical report generation. Despite Med-LVLMs producing state-of-the-art performance, they exhibit a bias toward predicting all findings as normal, leading to…

多智能体系统 · 计算机科学 2025-05-27 Pengyu Wang , Shuchang Ye , Usman Naseem , Jinman Kim

Prevalent supervised learning methods in natural language processing (NLP) are notoriously data-hungry, which demand large amounts of high-quality annotated data. In practice, acquiring such data is a costly endeavor. Recently, the superior…

计算与语言 · 计算机科学 2023-11-01 Ruoyu Zhang , Yanzeng Li , Yongliang Ma , Ming Zhou , Lei Zou

Single-cell RNA sequencing (scRNA-seq) technology provides high-throughput gene expression data to study the cellular heterogeneity and dynamics of complex organisms. Graph neural networks (GNNs) have been widely used for automatic cell…

机器学习 · 计算机科学 2023-12-19 Rui Yang , Wenrui Dai , Chenglin Li , Junni Zou , Dapeng Wu , Hongkai Xiong

Large Language Model (LLM) Agents have demonstrated remarkable capabilities in task automation and intelligent decision-making, driving the widespread adoption of agent development frameworks such as LangChain and AutoGen. However, these…

人工智能 · 计算机科学 2025-10-10 Jiabin Tang , Tianyu Fan , Chao Huang

Time series data is ubiquitous across various domains, including manufacturing, finance, and healthcare. High-quality annotations are essential for effectively understanding time series and facilitating downstream tasks; however, obtaining…

人工智能 · 计算机科学 2025-05-20 Minhua Lin , Zhengzhang Chen , Yanchi Liu , Xujiang Zhao , Zongyu Wu , Junxiang Wang , Xiang Zhang , Suhang Wang , Haifeng Chen

As Large Language Models (LLMs) rapidly evolve, their influence in science is becoming increasingly prominent. The emerging capabilities of LLMs in task generalization and free-form dialogue can significantly advance fields like chemistry…

计算与语言 · 计算机科学 2024-02-21 Yin Fang , Kangwei Liu , Ningyu Zhang , Xinle Deng , Penghui Yang , Zhuo Chen , Xiangru Tang , Mark Gerstein , Xiaohui Fan , Huajun Chen

The rapid advancement of Large Language Models (LLMs) has driven novel applications across diverse domains, with LLM-based agents emerging as a crucial area of exploration. This survey presents a comprehensive analysis of LLM-based agents…

人工智能 · 计算机科学 2025-11-25 Ke Chen , Peiran Wang , Yaoning Yu , Xianyang Zhan , Haohan Wang

Large Language Models (LLMs) have demonstrated great potential in complex reasoning tasks, yet they fall short when tackling more sophisticated challenges, especially when interacting with environments through generating executable actions.…

计算与语言 · 计算机科学 2025-02-25 Yuqi Zhu , Shuofei Qiao , Yixin Ou , Shumin Deng , Shiwei Lyu , Yue Shen , Lei Liang , Jinjie Gu , Huajun Chen , Ningyu Zhang

Discovering scaling laws for predicting model performance at scale is a fundamental and open-ended challenge, mostly reliant on slow, case specific human experimentation. To investigate the potential for LLMs to automate this process, we…

Large language models excel at interpreting complex natural language instructions, enabling them to perform a wide range of tasks. In the life sciences, single-cell RNA sequencing (scRNA-seq) data serves as the "language of cellular…

计算与语言 · 计算机科学 2025-01-16 Yin Fang , Xinle Deng , Kangwei Liu , Ningyu Zhang , Jingyang Qian , Penghui Yang , Xiaohui Fan , Huajun Chen

Alzheimer's disease (AD) is a pervasive neurodegenerative disorder that leads to memory and behavior impairment severe enough to interfere with daily life activities. Understanding this disease pathogenesis can drive the development of new…

分子网络 · 定量生物学 2024-05-29 Xiaoxia Liu , Robert R Butler , Prashnna K Gyawali , Frank M Longo , Zihuai He

Single-cell reference atlases are large-scale, cell-level maps that capture cellular heterogeneity within an organ using single cell genomics. Given their size and cellular diversity, these atlases serve as high-quality training data for…

基因组学 · 定量生物学 2022-11-09 Jan Engelmann , Leon Hetzel , Giovanni Palla , Lisa Sikkema , Malte Luecken , Fabian Theis