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Sustainable management of marine ecosystems is vital for maintaining healthy fishery resources, and benefits from advanced scientific tools to accurately assess species distribution patterns. In fisheries science, two primary data sources…

Determining spatial distributions of species and communities are key objectives of ecology and conservation. Joint species distribution models use multi-species detection-nondetection data to estimate species and community distributions.…

应用统计 · 统计学 2022-12-15 Jeffrey W. Doser , Andrew O. Finley , Sudipto Banerjee

Joint species distribution models are popular in ecology for modeling covariate effects on species occurrence, while characterizing cross-species dependence. Data consist of multivariate binary indicators of the occurrences of different…

统计方法学 · 统计学 2025-07-08 Federica Stolf , David B. Dunson

Understanding the spatial distribution of animals, during all their life phases, as well as how the distributions are influenced by environmental covariates, is a fundamental requirement for the effective management of animal populations.…

应用统计 · 统计学 2020-10-26 Soraia Pereira , Raquel Menezes , Maria Manuel Angélico , Tiago Marques

Joint species distribution models (JSDM) are among the most important statistical tools in community ecology. They are routinely used for inference and various prediction tasks, such as to build species distribution maps or biomass…

Joint species distribution modeling is attracting increasing attention these days, acknowledging the fact that individual level modeling fails to take into account expected dependence/interaction between species. These models attempt to…

统计方法学 · 统计学 2019-08-27 Alan E. Gelfand , Shinichiro Shirota

1. Joint species distribution models (JSDMs) have gained considerable traction among ecologists over the past decade, due to their capacity to answer a wide range of questions at both the species- and the community-level. The family of…

统计方法学 · 统计学 2024-03-19 Pekka Korhonen , Francis K. C. Hui , Jenni Niku , Sara Taskinen , Bert van der Veen

A key problem in computational sustainability is to understand the distribution of species across landscapes over time. This question gives rise to challenging large-scale prediction problems since (i) hundreds of species have to be…

Joint Species Distribution Models are essential for understanding how ecological drivers shape species communities. However, most existing approaches are limited by rigid parametric distributions for count data and the inability to model…

统计方法学 · 统计学 2025-12-05 Lukas Graz , Luisa Barbanti , Roland Brandl , Torsten Hothorn

Understanding the assembly of ecosystems to estimate the number of species at different spatial scales is a challenging problem. Until now, maximum entropy approaches have lacked the important feature of considering space in an explicit…

种群与进化 · 定量生物学 2014-07-10 Matteo Adorisio , Jacopo Grilli , Samir Suweis , Sandro Azaele , Jayanth R. Banavar , Amos Maritan

Spatial two-component mixture models offer a robust framework for analyzing spatially correlated data with zero inflation. To circumvent potential biases introduced by assuming a specific distribution for the response variables, we employ a…

统计方法学 · 统计学 2025-09-17 Chung-Wei Shen , Bu-Ren Hsu , Chia-Ming Hsu , Chun-Shu Chen

A frequent challenge encountered with ecological data is how to interpret, analyze, or model data having a high proportion of zeros. Much attention has been given to zero-inflated count data, whereas models for non-negative continuous data…

统计方法学 · 统计学 2022-05-23 Becky Tang , Henry A Frye , Alan E. Gelfand , John A Silander

In fisheries ecology, species abundance data are often collected by multiple surveys, each with unique characteristics. This article is motivated by a dataset of Atlantic sea scallop abundance records along the northeast coast of the United…

应用统计 · 统计学 2026-04-03 Quan Vu , Francis K. C. Hui , A. H. Welsh , Samuel Muller , Eva Cantoni , Christopher R. Haak

Accelerating global biodiversity loss has highlighted the role of complex relationships and shared patterns among species in determining their responses to environmental changes. The structure of an ecological community, represented by…

应用统计 · 统计学 2025-09-03 Braden Scherting , Otso Ovaskainen , David B. Dunson

In ecology we may find scenarios where the same phenomenon (species occurrence, species abundance, etc.) is observed using two different types of samplers. For instance, species data can be collected from scientific sampling with a…

Species distribution models (SDMs) are widely used to predict species' geographic distributions, serving as critical tools for ecological research and conservation planning. Typically, SDMs relate species occurrences to environmental…

Multivariate spatially-oriented data sets are prevalent in the environmental and physical sciences. Scientists seek to jointly model multiple variables, each indexed by a spatial location, to capture any underlying spatial association for…

统计方法学 · 统计学 2021-08-19 Lu Zhang , Sudipto Banerjee

In an effort to effectively model observed patterns in the spatial configuration of individuals of multiple species in nature, we introduce the saturated pairwise interaction Gibbs point process. Its main strength lies in its ability to…

统计方法学 · 统计学 2023-02-27 Ian Flint , Nick Golding , Peter Vesk , Yan Wang , Aihua Xia

Species distribution models (SDM) are a key tool in ecology, conservation and management of natural resources. Two key components of the state-of-the-art SDMs are the description for species distribution response along environmental…

统计方法学 · 统计学 2021-11-08 Jarno Vanhatalo , Marcelo Hartmann , Lari Veneranta

Joint modeling of spatially-oriented dependent variables is commonplace in the environmental sciences, where scientists seek to estimate the relationships among a set of environmental outcomes accounting for dependence among these outcomes…

统计方法学 · 统计学 2021-03-22 Lu Zhang , Sudipto Banerjee , Andrew O. Finley
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