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Objective: Applying large language models (LLMs) to the clinical domain is challenging due to the context-heavy nature of processing medical records. Retrieval-augmented generation (RAG) offers a solution by facilitating reasoning over…

Mapping and translating professional but arcane clinical jargons to consumer language is essential to improve the patient-clinician communication. Researchers have used the existing biomedical ontologies and consumer health vocabulary…

机器学习 · 计算机科学 2018-06-26 Wei-Hung Weng , Peter Szolovits

Word embeddings have been shown adept at capturing the semantic and syntactic regularities of the natural language text, as a result of which these representations have found their utility in a wide variety of downstream content analysis…

计算与语言 · 计算机科学 2021-03-02 Kishlay Jha

Risk adjustment has become an increasingly important tool in healthcare. It has been extensively applied to payment adjustment for health plans to reflect the expected cost of providing coverage for members. Risk adjustment models are…

机器学习 · 计算机科学 2019-07-16 Qiu-Yue Zhong , Andrew H. Fairless , Jasmine M. McCammon , Farbod Rahmanian

Extracting structured medical insights from unstructured clinical text using Natural Language Processing (NLP) remains an open challenge in healthcare, particularly in non-English contexts where resources are scarce. This study presents a…

In Natural Language Processing (NLP), Machine Reading Comprehension (MRC) is the task of answering a question based on a given context. To handle questions in the medical domain, modern language models such as BioBERT, SciBERT and even…

计算与语言 · 计算机科学 2024-12-16 Saptarshi Sengupta , Connor Heaton , Suhan Cui , Soumalya Sarkar , Prasenjit Mitra

In rural regions of several developing countries, access to quality healthcare, medical infrastructure, and professional diagnosis is largely unavailable. Many of these regions are gradually gaining access to internet infrastructure,…

计算与语言 · 计算机科学 2021-06-03 Vishal Vinod , Susmit Agrawal , Vipul Gaurav , Pallavi R , Savita Choudhary

A wide range of imaging techniques and data formats available for medical images make accurate retrieval from image databases challenging. Efficient retrieval systems are crucial in advancing medical research, enabling large-scale studies…

计算机视觉与模式识别 · 计算机科学 2023-11-23 Farnaz Khun Jush , Tuan Truong , Steffen Vogler , Matthias Lenga

In the medical domain, identifying and expanding abbreviations in clinical texts is a vital task for both better human and machine understanding. It is a challenging task because many abbreviations are ambiguous especially for intensive…

计算与语言 · 计算机科学 2018-06-11 Yue Liu , Tao Ge , Kusum S. Mathews , Heng Ji , Deborah L. McGuinness

Information retrieval (IR) for precision medicine (PM) often involves looking for multiple pieces of evidence that characterize a patient case. This typically includes at least the name of a condition and a genetic variation that applies to…

计算与语言 · 计算机科学 2020-12-18 Jiho Noh , Ramakanth Kavuluru

The Precision Medicine Initiative states that treatments for a patient should take into account not only the patient's disease, but his/her specific genetic variation as well. The vast biomedical literature holds the potential for…

信息检索 · 计算机科学 2019-04-22 Jiaming Qu , Yue Wang

Word embeddings have been widely used in biomedical Natural Language Processing (NLP) applications as they provide vector representations of words capturing the semantic properties of words and the linguistic relationship between words.…

Organizations face the challenge of ensuring compliance with an increasing amount of requirements from various regulatory documents. Which requirements are relevant depends on aspects such as the geographic location of the organization, its…

计算与语言 · 计算机科学 2024-01-09 Catherine Sai , Shazia Sadiq , Lei Han , Gianluca Demartini , Stefanie Rinderle-Ma

Semantic concepts and relations encoded in domain-specific ontologies and other medical semantic resources play a crucial role in deciphering terms in medical queries and documents. The exploitation of these resources for tackling the…

信息检索 · 计算机科学 2020-05-19 Mohammed Maree , Israa Noor , Khaled Rabayah , Mohammed Belkhatir , Saadat M. Alhashmi

Background: Many efforts have been put into the use of automated approaches, such as natural language processing (NLP), to mine or extract data from free-text medical records to construct comprehensive patient profiles for delivering better…

Pre-trained language models (PLMs) have proven to be effective for document re-ranking task. However, they lack the ability to fully interpret the semantics of biomedical and health-care queries and often rely on simplistic patterns for…

计算与语言 · 计算机科学 2023-05-09 Deepak Gupta , Dina Demner-Fushman

The terminology used in Biomedicine shows lexical peculiarities that have required the elaboration of terminological resources and information retrieval systems with specific functionalities. The main characteristics are the high rates of…

计算与语言 · 计算机科学 2012-04-02 Mónica Marrero , Sonia Sánchez-Cuadrado , Julián Urbano , Jorge Morato , José-Antonio Moreiro

Keyword-based searches are today's standard in digital libraries. Yet, complex retrieval scenarios like in scientific knowledge bases, need more sophisticated access paths. Although each document somewhat contributes to a domain's body of…

信息检索 · 计算机科学 2024-12-23 Hermann Kroll , Pascal Sackhoff , Timo Breuer , Ralf Schenkel , Wolf-Tilo Balke

Representation learning on electronic health records (EHRs) plays a vital role in downstream medical prediction tasks. Although natural language processing techniques, such as recurrent neural networks, and self-attention, have been adapted…

人工智能 · 计算机科学 2026-01-12 Xueping Peng , Guodong Long , Tao Shen , Sen Wang , Chengqi Zhang , Allison Clarke , Clement Schlegel

The growth rate in the amount of biomedical documents is staggering. Unlocking information trapped in these documents can enable researchers and practitioners to operate confidently in the information world. Biomedical NER, the task of…

计算与语言 · 计算机科学 2021-06-24 Xiang Dai
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