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相关论文: Stochastic dynamics at the back of a gene drive pr…

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Understanding the temporal spread of gene drive alleles -- alleles that bias their own transmission -- through modeling is essential before any field experiments. In this paper, we present a deterministic reaction-diffusion model describing…

偏微分方程分析 · 数学 2023-11-01 Léna Kläy , Léo Girardin , Vincent Calvez , Florence Débarre

Gene drives have the potential to rapidly replace a harmful wild-type allele with a gene drive allele engineered to have desired functionalities. However, an accidental or premature release of a gene drive construct to the natural…

种群与进化 · 定量生物学 2017-08-23 Hidenori Tanaka , Howard A. Stone , David R. Nelson

The spread of synthetic gene drives is often discussed in the context of panmictic populations connected by gene flow and described with simple deterministic models. Under such assumptions, an entire species could be altered by releasing a…

种群与进化 · 定量生物学 2020-09-10 Sumit Dhole , Alun L Lloyd , Fred Gould

A strong demographic Allee effect in which the expected population growth rate is negative below a certain critical population size can cause high extinction probabilities in small introduced populations. However, many species are…

种群与进化 · 定量生物学 2013-11-22 Meike J. Wittmann , Wilfried Gabriel , Dirk Metzler

Natural populations often show enhanced genetic drift consistent with a strong skew in their offspring number distribution. The skew arises because the variability of family sizes is either inherently strong or amplified by population…

种群与进化 · 定量生物学 2022-01-13 Takashi Okada , Oskar Hallatschek

We study the impact of a hard selective sweep on the genealogy of partially linked neutral loci in the vicinity of the positively selected allele. We consider a sexual population of stochastically varying size and, focusing on two…

概率论 · 数学 2016-05-10 Rebekka Brink-Spalink , Charline Smadi

We are concerned with a special form of the (stochastic) Allen-Cahn equation, which can be seen as a model of hybrid zones in population genetics. Individuals in the population can be of one of three types; $aa$ are fitter than $AA$, and…

概率论 · 数学 2022-04-04 Alison M. Etheridge , Mitchell D. Gooding , Ian Letter

This paper is concerned with a reaction--diffusion system modeling the fixation and the invasion in a population of a gene drive (an allele biasing inheritance, increasing its own transmission to offspring). In our model, the gene drive has…

偏微分方程分析 · 数学 2021-10-01 Léo Girardin , Florence Débarre

Population management using artificial gene drives (alleles biasing inheritance, increasing their own transmission to offspring) is becoming a realistic possibility with the development of CRISPR-Cas genetic engineering. A gene drive may…

偏微分方程分析 · 数学 2019-07-15 Léo Girardin , Vincent Calvez , Florence Débarre

A demographic Allee effect occurs when individual fitness, at low densities, increases with population density. Coupled with environmental fluctuations in demographic rates, Allee effects can have subtle effects on population persistence…

概率论 · 数学 2014-05-08 Gregory Roth , Sebastian Schreiber

Large populations may contain numerous simultaneously segregating polymorphisms subject to natural selection. Since selection acts on individuals whose fitness depends on many loci, different loci affect each other's dynamics. This leads to…

种群与进化 · 定量生物学 2011-08-09 Richard A. Neher , Boris I. Shraiman

Classical models of biological invasions assess species spread in homogeneous landscapes by assuming constant growth rates and random local movement. Mounting evidence suggests, however, that demographic stochasticity, environmental…

种群与进化 · 定量生物学 2016-03-01 Andrea Giometto , Florian Altermatt , Andrea Rinaldo

Evolutionary analyses of large populations commonly incorporate stochasticity through temporal variation in selection while treating genetic transmission as fixed. Much less attention has been given to stochasticity in transmission itself.…

种群与进化 · 定量生物学 2026-02-24 Elisa Heinrich-Mora , Marcus Feldman

When a biological population expands into new territory, genetic drift develops an enormous influence on evolution at the propagating front. In such range expansion processes, fluctuations in allele frequencies occur through stochastic…

生物物理 · 物理学 2018-12-24 Sherry Chu , Mehran Kardar , David R. Nelson , Daniel A. Beller

Classical stochastic demography predicts that environmental stochasticity reduces population growth rates and, thereby, can increase extinction risk. In contrast, the SAS-CFF model demonstrates that environmental stochasticity can promote…

种群与进化 · 定量生物学 2019-07-25 Sebastian J. Schreiber

Spatially resolved genetic data is increasingly used to reconstruct the migrational history of species. To assist such inference, we study, by means of simulations and analytical methods, the dynamics of neutral gene frequencies in a…

种群与进化 · 定量生物学 2008-01-15 Oskar Hallatschek , David R. Nelson

In species reproducing both sexually and asexually clones are often more common in recently established populations. Earlier studies have suggested that this pattern arises from natural selection favouring asexual recruitment in young…

Heterogeneities in environmental conditions often induce corresponding heterogeneities in the distribution of species. In the extreme case of a localized patch of increased growth rates, reproducing populations can become strongly…

种群与进化 · 定量生物学 2013-01-17 Lukas Geyrhofer , Oskar Hallatschek

Frequency-dependent selection reflects the interaction between different species as they battle for limited resources in their environment. In a stochastic evolutionary game the species relative fitnesses guides the evolutionary dynamics…

概率论 · 数学 2020-12-29 Lea Popovic , Liam Peuckert

We consider an exponentially growing population of cells undergoing mutations and ask about the effect of reproductive fluctuations (genetic drift) on its long-term evolution. We combine first step analysis with the stochastic dynamics of a…

种群与进化 · 定量生物学 2022-03-14 Arman Angaji , Christoph Velling , Johannes Berg
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