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Particles that are catalytically-active and chemotactic can interact through the concentration fields upon which they act, which in turn may lead to wide-scale spatial self-organization. When these active particles interact through several…

软凝聚态物质 · 物理学 2023-10-12 Vincent Ouazan-Reboul , Ramin Golestanian , Jaime Agudo-Canalejo

Diffusion models generate structure by progressively transforming noise into data, yet the mechanisms underlying this transition remain poorly understood. In this work, we show that pattern formation in trained diffusion models can be…

机器学习 · 计算机科学 2026-04-29 Luca Ambrogioni

Pattern formation, arising from systems of autonomous reaction-diffusion equations, on networks has become a common topic of study in the scientific literature. In this work we focus primarily on directed networks. Although some work prior…

斑图形成与孤子 · 物理学 2022-10-19 Joshua Ritchie

It is well-known that in two dimensions Turing systems produce spots, stripes and labyrinthine patterns, and in three dimensions lamellar and spherical structures or their combinations are observed. We study transitions between these states…

统计力学 · 物理学 2007-05-23 Teemu Leppanen , Mikko Karttunen , R. A. Barrio , Kimmo Kaski

Turing patterns are a cornerstone of biological self-organization, yet their emergence typically requires finely tuned parameters occupying narrow regions of high-dimensional space. This poses a fundamental challenge: how can evolving…

细胞行为 · 定量生物学 2026-05-18 Seyoon Kim , Antonio Matas-Gil , Robert G. Endres

Turing patterns on unbounded domains have been widely studied in systems of reaction-diffusion equations. However, up to now, they have not been studied for systems of conservation laws. Here, we (i) derive conditions for Turing instability…

偏微分方程分析 · 数学 2018-01-17 Blake Barker , Soyeun Jung , Kevin Zumbrun

We propose a new mechanism for pattern formation based on the global alternation of two dynamics neither of which exhibits patterns. When driven by either one of the separate dynamics, the system goes to a spatially homogeneous state…

统计力学 · 物理学 2009-11-07 J. Buceta , Katja Lindenberg , J. M. R. Parrondo

We investigate the hydrodynamic stability and the formation of patterns in a continuum model of epithelial layers, able to account for the interplay between mechanical activity, lateral adhesion and the $6-$fold orientational order…

软凝聚态物质 · 物理学 2025-02-19 Josep-Maria Armengol-Collado , Leonardo Puggioni , Livio N. Carenza , Luca Giomi

Intracellular protein patterns regulate a variety of vital cellular processes such as cell division and motility, which often involve dynamic changes of cell shape. These changes in cell shape may in turn affect the dynamics of…

斑图形成与孤子 · 物理学 2023-07-19 Laeschkir Würthner , Andriy Goychuk , Erwin Frey

Changes in environmental or system parameters often drive major biological transitions, including ecosystem collapse, disease outbreaks, and tumor development. Analyzing the stability of steady states in dynamical systems provides critical…

种群与进化 · 定量生物学 2025-05-02 Joseph Cummings , Kyle J. -M. Dahlin , Elizabeth Gross , Jonathan D. Hauenstein

The formation of vegetation patterns in the arid and the semi-arid climatic zones is studied. Threshold for the biomass of the perennial flora is shown to be a relevant factor, leading to a frozen disordered patterns in the arid zone. In…

软凝聚态物质 · 物理学 2009-11-07 N. M. Shnerb , P. Sara , H. Lavee , S. Solomon

Collective motion of chemotactic bacteria as E. Coli relies, at the individual level, on a continuous reorientation by runs and tumbles. It has been established that the length of run is decided by a stiff response to a temporal sensingof…

偏微分方程分析 · 数学 2018-08-15 Benoît Perthame , Shugo Yasuda

In order to investigate the evolutionary process of many deterministic Dynamical systems with unfixed parameter, a set of dynamical models with parameter changing continuously and the accumulation of this change might be large is introduced…

comp-gas · 物理学 2008-02-03 H. P. Fang

We estimate density of defects frozen into a biological Turing pattern which was turned on at a finite rate. A self-locking of gene expression in individual cells, which makes the Turing transition discontinuous, stabilizes the pattern…

生物物理 · 物理学 2007-05-23 Jacek Dziarmaga

Alan Turing's work in Morphogenesis has received wide attention during the past 60 years. The central idea behind his theory is that two chemically interacting diffusible substances are able to generate stable spatial patterns, provided…

定量方法 · 定量生物学 2014-07-29 Tatiana T. Marquez-Lago , Pablo Padilla

Pattern formation in the classical and fractional Schnakenberg equations is studied to understand the nonlocal effects of anomalous diffusion. Starting with linear stability analysis, we find that if the activator and inhibitor have the…

斑图形成与孤子 · 物理学 2021-06-21 Hatim Khudhair , Yanzhi Zhang , Nobuyuki Fukawa

Turing patterns play a fundamental role in morphogenesis and population dynamics, encoding key information about the underlying biological mechanisms. Yet, traditional inverse problems have largely relied on non-biological data such as…

偏微分方程分析 · 数学 2025-09-10 Yuhan Li , Hongyu Liu , Catharine W. K. Lo

Laminar-turbulent pattern formation is a distinctive feature of the intermittency regime in subcritical plane shear flows. By performing extensive numerical simulations of the plane channel flow, we show that the pattern emerges from a…

流体动力学 · 物理学 2022-12-16 Pavan V. Kashyap , Yohann Duguet , Olivier Dauchot

We investigate diffusion-driven instabilities in a FitzHugh-Nagumo reaction-diffusion system with superdiffusive transport, modeled by fractional Laplacian operators with different diffusion orders for the activator and the inhibitor. A…

斑图形成与孤子 · 物理学 2026-03-04 Rossella Rizzo , Gaetana Gambino , Vincenzo Sciacca , Marco Sammartino

Vegetation patterns are a ubiquitous feature of water-deprived ecosystems. Despite the competition for the same limiting resource, coexistence of several plant species is commonly observed. We propose a two-species reaction-diffusion model…

种群与进化 · 定量生物学 2019-11-26 Lukas Eigentler , Jonathan A. Sherratt