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A ternary reaction-diffusion model for early HIV infection dynamics, incorporating logistic growth of target cells, is introduced. According to in vitro and in vivo studies, random movement of target cells, infected cells, and virions and a…

种群与进化 · 定量生物学 2024-10-21 Florinda Capone , Roberta De Luca , Vincenzo Luongo

Intracellular protein patterns govern essential cellular functions by dynamically redistributing proteins between membrane-bound and cytosolic states, conserving their total numbers. This review presents a theoretical framework for…

生物物理 · 物理学 2025-12-16 Erwin Frey , Henrik Weyer

Turing theory of pattern formation is among the most popular theoretical means to account for the variety of spatio-temporal structures observed in Nature and, for this reason, finds applications in many different fields. While Turing…

斑图形成与孤子 · 物理学 2025-10-22 Riccardo Muolo , Luca Gallo , Vito Latora , Mattia Frasca , Timoteo Carletti

Collective organisation of patterns into ring-like configurations has been well-studied when patterns are subject to either weak or semi-strong interactions. However, little is known numerically or analytically about their formation when…

动力系统 · 数学 2024-03-06 Dan J. Hill , Jason J. Bramburger , David J. B. Lloyd

Turing patterns in reaction-diffusion (RD) systems have classically been studied only in RD systems which do not explicitly depend on independent variables such as space. In practise, many systems for which Turing patterning is important…

偏微分方程分析 · 数学 2023-01-23 Jacob C. Vandenberg , Mark B. Flegg

We study instabilities and pattern formation in reaction-diffusion layers that are diffusively coupled. For two-layer systems of identical two-component reactions, we analyze the stability of homogeneous steady states by exploiting the…

斑图形成与孤子 · 物理学 2015-06-03 Anne J. Catlla , Amelia McNamara , Chad M. Topaz

A stochastic version of the Brusselator model is proposed and studied via the system size expansion. The mean-field equations are derived and shown to yield to organized Turing patterns within a specific parameters region. When determining…

统计力学 · 物理学 2015-05-14 Tommaso Biancalani , Duccio Fanelli , Francesca Di Patti

Since its introduction in 1952, Turing's (pre-)pattern theory ("the chemical basis of morphogenesis") has been widely applied to a number of areas in developmental biology. The related pattern formation models normally comprise a system of…

细胞行为 · 定量生物学 2020-10-28 Fiona R Macfarlane , Mark AJ Chaplain , Tommaso Lorenzi

In this paper we investigate pattern formation in Keller--Segel chemotaxis models over a multi--dimensional bounded domain subject to homogeneous Neumann boundary conditions. It is shown that the positive homogeneous steady state loses its…

偏微分方程分析 · 数学 2016-03-29 Ling Jin , Qi Wang , Zengyan Zhang

We explain the principles of gene expression pattern stabilization in systems of interacting, diffusible morphogens, with dynamically established source regions. Using a reaction-diffusion model with step-function production term, we…

生物物理 · 物理学 2023-03-02 M. Majka , R. D. J. G. Ho , M. Zagorski

The universal equations describing collective oscillations of the multidomain patterns of small period in an arbitrary $d$-dimensional reaction-diffusion system of the activator-inhibitor type are asymptotically derived. It is shown that…

patt-sol · 物理学 2009-10-30 C. B. Muratov

We present a modified water-vegetation model to investigate the mechanistic relationship between infiltration-soil moisture feedback and vegetation pattern in arid/semi-arid ecosystems. Employing Turing pattern formation theory, we drive…

动力系统 · 数学 2025-08-05 Juan Yan , Xiaoli Wang , Guohong Zhang , Yuan Yuan

In their way to/from turbulence, plane wall-bounded flows display an interesting transitional regime where laminar and turbulent oblique bands alternate, the origin of which is still mysterious. In line with Barkley's recent work about the…

流体动力学 · 物理学 2015-06-05 Paul Manneville

To investigate novel aspects of pattern formation in spin systems, we use a mapping between reactive concentrations in a reaction-diffusion system and spin orientations in a dynamic multiple-spin Ising model. While pattern formation in…

适应与自组织系统 · 物理学 2019-10-15 Mélody Merle , Laura Messio , Julien Mozziconacci

Spatial organization in metabolic pathways can arise from the interplay between enzymatic reaction kinetics and diffusion-driven instabilities. In this work we investigate how reversible enzyme--substrate binding influences pattern…

分子网络 · 定量生物学 2026-04-27 Faezeh Farivar

The modelling of linear and nonlinear reaction-subdiffusion processes is more subtle than normal diffusion and causes different phenomena. The resulting equations feature a spatial Laplacian with a temporal memory term through a time…

偏微分方程分析 · 数学 2021-08-24 Jichen Yang , Jens D. M. Rademacher

Turing patterns are stationary, wave-like structures that emerge from the nonequilibrium assembly of reactive and diffusive components. While they are foundational in biophysics, their classical formulation relies on a single characteristic…

软凝聚态物质 · 物理学 2026-01-30 Siamak Mirfendereski , Ankur Gupta

We study the pattern formation of chiral charges in the presence of reactions. We show that, in contrast to the original Turing's mechanism of pattern formation in diffusion-reaction systems, the interplay between chiral effects and…

统计力学 · 物理学 2018-08-02 Naoki Yamamoto

Systems of dynamical interactions between competing species can be used to model many complex systems, and can be mathematically described by {\em random} networks. Understanding how patterns of activity arise in such systems is important…

适应与自组织系统 · 物理学 2016-01-21 Nick McCullen , Thomas Wagenknecht

Enhancement of the predictive power and robustness of nonlinear population dynamics models allows ecologists to make more reliable forecasts about species' long term survival. However, the limited availability of detailed ecological data,…

斑图形成与孤子 · 物理学 2025-04-18 Indrajyoti Gaine , Malay Banerjee