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The nematode Caenorhabditis elegans is a well-known model organism used to investigate fundamental questions in biology. Motility assays of this small roundworm are designed to study the relationships between genes and behavior. Commonly,…

计算机视觉与模式识别 · 计算机科学 2015-05-19 Raphael Sznitman , Manaswi Gupta , Gregory D. Hager , Paulo E. Arratia , Josue Sznitman

The connectome, or the entire connectivity of a neural system represented by network, ranges various scales from synaptic connections between individual neurons to fibre tract connections between brain regions. Although the modularity they…

神经元与认知 · 定量生物学 2014-10-01 Jinseop S. Kim , Marcus Kaiser

Convolutional neural networks (CNNs) for biomedical image analysis are often of very large size, resulting in high memory requirement and high latency of operations. Searching for an acceptable compressed representation of the base CNN for…

计算机视觉与模式识别 · 计算机科学 2019-09-10 Suraj Mishra , Peixian Liang , Adam Czajka , Danny Z. Chen , X. Sharon Hu

Segmenting highly-overlapping image objects is challenging, because there is typically no distinction between real object contours and occlusion boundaries on images. Unlike previous instance segmentation methods, we model image formation…

计算机视觉与模式识别 · 计算机科学 2023-03-13 Lei Ke , Yu-Wing Tai , Chi-Keung Tang

Connectomics has focused primarily on the mapping of synaptic links in the brain; yet it is well established that extrasynaptic volume transmission, especially via monoamines and neuropeptides, is also critical to brain function. Here we…

Cell instance segmentation in cytology images has significant importance for biology analysis and cancer screening, while remains challenging due to 1) the extensive overlapping translucent cell clusters that cause the ambiguous boundaries,…

计算机视觉与模式识别 · 计算机科学 2023-03-28 Hao Jiang , Rushan Zhang , Yanning Zhou , Yumeng Wang , Hao Chen

Medical image segmentation can provide a reliable basis for further clinical analysis and disease diagnosis. The performance of medical image segmentation has been significantly advanced with the convolutional neural networks (CNNs).…

图像与视频处理 · 电气工程与系统科学 2022-03-02 Ruxin Wang , Shuyuan Chen , Chaojie Ji , Jianping Fan , Ye Li

Accurate medical image segmentation is essential for diagnosis and treatment planning of diseases. Convolutional Neural Networks (CNNs) have achieved state-of-the-art performance for automatic medical image segmentation. However, they are…

图像与视频处理 · 电气工程与系统科学 2020-11-05 Ran Gu , Guotai Wang , Tao Song , Rui Huang , Michael Aertsen , Jan Deprest , Sébastien Ourselin , Tom Vercauteren , Shaoting Zhang

The nematode Caenorhabditis elegans (C. elegans) serves as an important model organism in a wide variety of biological studies. In this paper we introduce a pipeline for automated analysis of C. elegans imagery for the purpose of studying…

计算机视觉与模式识别 · 计算机科学 2020-05-12 Linfeng Wang , Shu Kong , Zachary Pincus , Charless Fowlkes

Background: Brain tumor segmentation has a significant impact on the diagnosis and treatment of brain tumors. Accurate brain tumor segmentation remains challenging due to their irregular shapes, vague boundaries, and high variability.…

计算机视觉与模式识别 · 计算机科学 2025-05-07 Zhanyuan Jia , Ni Yao , Danyang Sun , Chuang Han , Yanting Li , Jiaofen Nan , Fubao Zhu , Chen Zhao , Weihua Zhou

Segmenting highly-overlapping objects is challenging, because typically no distinction is made between real object contours and occlusion boundaries. Unlike previous two-stage instance segmentation methods, we model image formation as…

计算机视觉与模式识别 · 计算机科学 2021-03-24 Lei Ke , Yu-Wing Tai , Chi-Keung Tang

Whole brain segmentation using deep learning (DL) is a very challenging task since the number of anatomical labels is very high compared to the number of available training images. To address this problem, previous DL methods proposed to…

图像与视频处理 · 电气工程与系统科学 2019-11-22 Pierrick Coupé , Boris Mansencal , Michaël Clément , Rémi Giraud , Baudouin Denis de Senneville , Vinh-Thong Ta , Vincent Lepetit , José V. Manjon

Lung segmentation in chest X-ray images is of paramount importance as it plays a crucial role in the diagnosis and treatment of various lung diseases. This paper presents a novel approach for lung segmentation in chest X-ray images by…

图像与视频处理 · 电气工程与系统科学 2024-05-08 Mohammad Ali Labbaf Khaniki , Mohammad Manthouri

Medical ultrasound image segmentation presents a formidable challenge in the realm of computer vision. Traditional approaches rely on Convolutional Neural Networks (CNNs) and Transformer-based methods to address the intricacies of medical…

计算机视觉与模式识别 · 计算机科学 2025-08-20 Weixin Xu , Ziliang Wang

In the field of healthcare, precise skin lesion segmentation is crucial for the early detection and accurate diagnosis of skin diseases. Despite significant advances in deep learning for image processing, existing methods have yet to…

计算机视觉与模式识别 · 计算机科学 2025-12-09 Siyu Wang , Hua Wang , Huiyu Li , Fan Zhang

Finding an optimal correspondence between point sets is a common task in computer vision. Existing techniques assume relatively simple relationships among points and do not guarantee an optimal match. We introduce an algorithm capable of…

计算机视觉与模式识别 · 计算机科学 2023-01-11 Andrew Lauziere , Ryan Christensen , Hari Shroff , Radu Balan

Precision medicine in the quantitative management of chronic diseases and oncology would be greatly improved if the Computed Tomography (CT) scan of any patient could be segmented, parsed and analyzed in a precise and detailed way. However,…

Medical image segmentation, particularly in multi-domain scenarios, requires precise preservation of anatomical structures across diverse representations. While deep learning has advanced this field, existing models often struggle with…

计算机视觉与模式识别 · 计算机科学 2025-05-27 Afshin Bozorgpour , Sina Ghorbani Kolahi , Reza Azad , Ilker Hacihaliloglu , Dorit Merhof

Plant parasitic nematodes cause damage to crop plants on a global scale. Robust detection on image data is a prerequisite for monitoring such nematodes, as well as for many biological studies involving the nematode C. elegans, a common…

计算机视觉与模式识别 · 计算机科学 2020-04-22 Long Chen , Martin Strauch , Matthias Daub , Xiaochen Jiang , Marcus Jansen , Hans-Georg Luigs , Susanne Schultz-Kuhlmann , Stefan Krüssel , Dorif Merhof

Deep learning models such as convolutional neural net- work have been widely used in 3D biomedical segmentation and achieve state-of-the-art performance. However, most of them often adapt a single modality or stack multiple modalities as…

计算机视觉与模式识别 · 计算机科学 2017-04-26 Kuan-Lun Tseng , Yen-Liang Lin , Winston Hsu , Chung-Yang Huang
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