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Revealing the functional sites of biological sequences, such as evolutionary conserved, structurally interacting or co-evolving protein sites, is a fundamental, and yet challenging task. Different frameworks and models were developed to…

定量方法 · 定量生物学 2019-06-07 Justas Dauparas , Haobo Wang , Avi Swartz , Peter Koo , Mor Nitzan , Sergey Ovchinnikov

We propose a novel and unified framework for change-point estimation in multivariate time series. The proposed method is fully nonparametric, enjoys effortless tuning and is robust to temporal dependence. One salient and distinct feature of…

统计方法学 · 统计学 2022-09-12 Zifeng Zhao , Feiyu Jiang , Xiaofeng Shao

Introduction: Modelling of relative treatment effects is an important aspect to consider when extrapolating the long-term survival outcomes of treatments. Flexible parametric models offer the ability to accurately model the observed data,…

统计方法学 · 统计学 2024-01-02 Philip Cooney , Arthur White

The manufacturing sector is envisioned to be heavily influenced by artificial intelligence-based technologies with the extraordinary increases in computational power and data volumes. A central challenge in manufacturing sector lies in the…

机器学习 · 计算机科学 2022-08-31 Ye Yuan , Guijun Ma , Cheng Cheng , Beitong Zhou , Huan Zhao , Hai-Tao Zhang , Han Ding

We present a Bayesian approach for modeling multivariate, dependent functional data. To account for the three dominant structural features in the data--functional, time dependent, and multivariate components--we extend hierarchical dynamic…

统计方法学 · 统计学 2019-07-02 Daniel R. Kowal , David S. Matteson , David Ruppert

This dissertation presents a general framework for changepoint detection based on L0 model selection. The core method, Iteratively Reweighted Fused Lasso (IRFL), improves upon the generalized lasso by adaptively reweighting penalties to…

统计方法学 · 统计学 2026-03-24 Michael Grantham , Xueheng Shi , Bertrand Clarke

We consider the problem of detecting multiple changepoints in large data sets. Our focus is on applications where the number of changepoints will increase as we collect more data: for example in genetics as we analyse larger regions of the…

统计方法学 · 统计学 2015-03-17 R. Killick , P. Fearnhead , I. A. Eckley

A novel data-driven methodology is presented for the joint selection of prior parameters for both fixed and random effects in Linear Mixed Models (LMMs). This approach facilitates the estimation of complex random-effects structures, as well…

统计方法学 · 统计学 2026-04-28 Matteo Amestoy , R. Vermeulen , Mark A. van de Wiel , Wessel N. van Wieringen

We propose generalized additive partial linear models for complex data which allow one to capture nonlinear patterns of some covariates, in the presence of linear components. The proposed method improves estimation efficiency and increases…

统计理论 · 数学 2014-05-26 Li Wang , Lan Xue , Annie Qu , Hua Liang

We review recent developments in detecting and estimating multiple change-points in time series models with exogenous and endogenous regressors, panel data models, and factor models. This review differs from others in multiple ways: (1) it…

计量经济学 · 经济学 2025-07-31 Otilia Boldea , Alastair R. Hall

A novel approach to quantile estimation in multivariate linear regression models with change-points is proposed: the change-point detection and the model estimation are both performed automatically, by adopting either the quantile fused…

统计理论 · 数学 2019-04-10 Gabriela Ciuperca , Matus Maciak

A class of multivariate mixed survival models for continuous and discrete time with a complex covariance structure is introduced in a context of quantitative genetic applications. The methods introduced can be used in many applications in…

应用统计 · 统计学 2014-05-06 Rafael Pimentel Maia , Per Madsen , Rodrigo Labouriau

Changepoint detection is commonly formulated by minimizing the sum of in-sample losses to quantify the model's overall fit. However, for flexible modeling procedures -- especially those involving high-dimensional parameter spaces or…

统计方法学 · 统计学 2026-05-05 Chengde Qian , Guanghui Wang , Zhaojun Wang , Changliang Zou

Very long and noisy sequence data arise from biological sciences to social science including high throughput data in genomics and stock prices in econometrics. Often such data are collected in order to identify and understand shifts in…

统计方法学 · 统计学 2016-07-15 Yue S. Niu , Ning Hao , Heping Zhang

This work introduces a novel framework for dynamic factor model-based group-level analysis of multiple subjects time series data, called GRoup Integrative DYnamic factor (GRIDY) models. The framework identifies and characterizes…

统计方法学 · 统计学 2024-07-29 Younghoon Kim , Zachary F. Fisher , Vladas Pipiras

In this article, we consider change point inference for high dimensional linear models. For change point detection, given any subgroup of variables, we propose a new method for testing the homogeneity of corresponding regression…

统计方法学 · 统计学 2024-01-17 Bin Liu , Xinsheng Zhang , Yufeng Liu

One fundamental statistical question for research areas such as precision medicine and health disparity is about discovering effect modification of treatment or exposure by observed covariates. We propose a semiparametric framework for…

统计方法学 · 统计学 2020-08-04 Muxuan Liang , Menggang Yu

Adaptive enrichment allows for pre-defined patient subgroups of interest to be investigated throughout the course of a clinical trial. Many trials which measure a long-term time-to-event endpoint often also routinely collect repeated…

统计方法学 · 统计学 2024-02-26 Abigail J. Burdon , Richard D. Baird , Thomas Jaki

Linear mixed models are widely used to analyze non-independent data, but inference for fixed effects can be unreliable under misspecification of the random-effects distribution, inaccurate Fisher information estimation, or convergence…

统计方法学 · 统计学 2026-05-01 Angela Andreella , Livio Finos

We propose a general framework for non-normal multivariate data analysis called multivariate covariance generalized linear models (McGLMs), designed to handle multivariate response variables, along with a wide range of temporal and spatial…

统计方法学 · 统计学 2017-04-25 Wagner Hugo Bonat , Bent Jørgensen