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The formation and dynamics of swarms is wide spread in living systems, from bacterial bio-films to schools of fish and flocks of birds. We study this emergent collective behavior in a model of active Brownian particles with…

软凝聚态物质 · 物理学 2024-06-04 Rajendra Singh Negi , Roland G. Winkler , Gerhard Gompper

Self-organization creates new order and shifts sub-boundaries while reorganizing energy and entropy within a control volume. This article examines pathway selection and tests whether maximizing the entropy generation rate can forecast…

材料科学 · 物理学 2026-03-10 J. A. Sekhar

Patterns arise spontaneously in a range of systems spanning the sciences, and their study typically focuses on mechanisms to understand their evolution in space-time. Increasingly, there has been a transition towards controlling these…

软凝聚态物质 · 物理学 2024-10-17 Vishaal Krishnan , Sumit Sinha , L. Mahadevan

When particles move at a constant speed and have the tendency to align their directions of motion, ordered large scale movement can emerge despite significant levels of noise. Many variants of this model of self-propelled particles have…

生物物理 · 物理学 2012-12-11 Matthias Meschede , Oskar Hallatschek

We review theoretical models of individual motility as well as collective dynamics and pattern formation of active particles. We focus on simple models of active dynamics with a particular emphasis on nonlinear and stochastic dynamics of…

其他凝聚态物理 · 物理学 2015-06-04 Pawel Romanczuk , Markus Bär , Werner Ebeling , Benjamin Lindner , Lutz Schimansky-Geier

Many of life's most fascinating phenomena emerge from interactions among many elements--many amino acids determine the structure of a single protein, many genes determine the fate of a cell, many neurons are involved in shaping our thoughts…

定量方法 · 定量生物学 2011-11-28 Thierry Mora , William Bialek

The motion of several self-propelled boats in a narrow channel displays spontaneous pattern formation and kinetic phase transitions. In contrast with previous studies on self-propelled particles, this model does not require stochastic…

统计力学 · 物理学 2012-06-13 Eric Heisler , Nobuhiko J. Suematsu , Akinori Awazu , Hiraku Nishimori

When a high voltage is applied to pure water filling two beakers kept close to each other, a connection forms spontaneously, giving the impression of a floating water bridge. This phenomenon is of special interest, since it comprises a…

经典物理 · 物理学 2010-04-07 Emilio Del Giudice , Elmar C. Fuchs , Giuseppe Vitiello

In systems of programmable matter, we are given a collection of simple computation elements (or particles) with limited (constant-size) memory. We are interested in when they can self-organize to solve system-wide problems of movement,…

分布式、并行与集群计算 · 计算机科学 2019-02-27 Sarah Cannon , Joshua J. Daymude , Dana Randall , Andréa W. Richa

Understanding physical rules underlying collective motions requires perturbation of controllable parameters in self-propelled particles. However, controlling parameters in animals is generally not easy, which makes collective behaviours of…

生物物理 · 物理学 2019-01-31 Takuma Sugi , Hiroshi Ito , Masaki Nishimura , Ken H. Nagai

A standard belief on emerging collective behavior is that it emerges from simple individual rules. Most of the mathematical research on such collective behavior starts from imperative individual rules, like always go to the center. But how…

种群与进化 · 定量生物学 2018-02-23 El Mahdi El Mhamdi , Rachid Guerraoui , Alexandre Maurer , Vladislav Tempez

We show that transport in the presence of entropic barriers exhibits peculiar characteristics which makes it distinctly different from that occurring through energy barriers. The constrained dynamics yields a scaling regime for the particle…

统计力学 · 物理学 2009-11-11 D. Reguera , G. Schmid , P. S. Burada , J. M. Rubí , P. Hänggi

Mutualistic networks are formed when the interactions between two classes of species are mutually beneficial. They are important examples of cooperation shaped by evolution. Mutualism between animals and plants plays a key role in the…

种群与进化 · 定量生物学 2013-08-23 Samir Suweis , Filippo Simini , Jayanth R. Banavar , Amos Maritan

Adaptive behavior is mainly the result of adaptive brains. We go a step beyond and claim that the brain does not only adapt to its surrounding reality but rather, it builds itself up to constructs its own reality. That is, rather than just…

神经与进化计算 · 计算机科学 2016-08-09 Fernando Corbacho

Bacteria possess diverse mechanisms to regulate their motility in response to environmental and physiological signals, enabling them to navigate complex habitats and adapt their behavior. Among these mechanisms, interspecies recognition…

种群与进化 · 定量生物学 2025-12-01 Mattia Mattei , David Soriano Paños , Mahantesh Halappanavar , Alex Arenas

Collective decision-making arises from individual agents integrating their own personal observations with information obtained from social partners. In many biological systems that exhibit collective decision-making, the process by which…

定量方法 · 定量生物学 2026-04-28 Ling-Wei Kong , Naomi Ehrich Leonard , Andrew M. Hein

The s=1/2 Ising chain with uniform nearest-neighbor and next-nearest-neighbor coupling is used to construct a system of floating particles characterized by motifs of up to six consecutive local spins. The spin couplings cause the assembly…

统计力学 · 物理学 2012-04-27 Ping Lu , Dan Liu , Gerhard Müller , Michael Karbach

The question how complex systems become more organized and efficient with time is open. Examples are, the formation of elementary particles from pure energy, the formation of atoms from particles, the formation of stars and galaxies, the…

物理与社会 · 物理学 2017-01-17 Georgi Georgiev , Atanu Chatterjee , Germano Iannacchione

We report on self-assemblies formed from spherical patchy particles interacting by a long-range attraction through a patch region in a two-dimensional system. We performed Monte Carlo simulations to find stable structures in a system with…

软凝聚态物质 · 物理学 2019-09-05 Masahide Sato

We study analytically and numerically a model metabolic cycle composed of an arbitrary number of species of catalytically active particles. Each species converts a substrate into a product, the latter being used as the substrate by the next…

软凝聚态物质 · 物理学 2023-09-29 Vincent Ouazan-Reboul , Jaime Agudo-Canalejo , Ramin Golestanian