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We study the dynamical properties of semiflexible polymers with a recently introduced bead-spring model. We focus on double-stranded DNA. The two parameters of the model, $T^*$ and $\nu$, are chosen to match its experimental force-extension…

软凝聚态物质 · 物理学 2014-11-07 Gerard T. Barkema , Debabrata Panja , J. M. J. van Leeuwen

We present results of Monte Carlo study of the monomer-monomer correlation functions, static structure factor and asphericity characteristics of a single homopolymer in the coil and globular states for three distinct architectures of the…

软凝聚态物质 · 物理学 2009-11-07 Edward G. Timoshenko , Yuri A. Kuznetsov , Ronan Connolly

An analytical Green's function is developed to study the acoustic scattering by a flat plate with a serrated edge. The scattered pressure is solved using the Wiener-Hopf technique in conjunction with the adjoint technique. It is shown that…

流体动力学 · 物理学 2023-05-10 Benshuai Lyu

Semiflexible polymers form central structures in biological material. Modeling approaches usually neglect influences of polymer-specific molecular features aiming to describe semiflexible polymers universally. Here, we investigate the…

A quantitative theory of the buckling of a worm like chain based on a semi-classical approximation of the partition function is presented. The contribution of thermal fluctuations to the force-extension relation that allows to go beyond the…

软凝聚态物质 · 物理学 2016-08-14 Marc Emanuel , Hervé Mohrbach , Mehmet Sayar , Helmut Schiessel , Igor M. Kulić

A general technique to analyze the classical interaction between ideal topological insulators, and electromagnetic sources and fields, has been previously elaborated. Nevertheless it is not immediately applicable in the laboratory as it…

强关联电子 · 物理学 2016-10-26 Alberto Martín-Ruiz , Mauro Cambiaso , Luis F. Urrutia

The dynamical properties of entangled polymers originate from the dynamic constraints due to the uncrossability between polymer chains. We propose a highly coarse-grained simulation model with transient bonds for such dynamically…

软凝聚态物质 · 物理学 2019-01-10 Takashi Uneyama

We present an analytical and computational study characterizing the structural and dynamical properties of an active filament confined in cylindrical channels. We first outline the effects of the interplay between confinement and polar…

软凝聚态物质 · 物理学 2024-10-09 José Martín-Roca , Emanuele Locatelli , Valentino Bianco , Paolo Malgaretti , Chantal Valeriani

We show that the mechanical properties of a worm-like-chain (WLC) polymer, of contour length $L$ and persistence length $\l$ such that $t=L/\l\sim{\cal O}(1)$, depend both on the ensemble and the constraint on end-orientations. In the…

统计力学 · 物理学 2015-06-25 Debasish Chaudhuri

A constitutive model is developed for the mechanical response of elastomers at finite strains. A polymer is treated as a network of linear chains linked by permanent (chemical crosslinks) and temporary (entanglements and van der Waals…

材料科学 · 物理学 2007-05-23 Aleksey D. Drozdov , Al Dorfmann

The stretching response of polymer chains fundamentally determines the mechanical properties of polymer networks. In this Letter, we develop a statistical mechanics model that incorporates both bond stretching and bond angle deformation,…

软凝聚态物质 · 物理学 2025-06-02 Jie Zhu , Laurence Brassart

The correlations in the motion of reptating polymers in their melt are investigated by means of kinetic Monte Carlo simulations of the three dimensional slithering snake version of the bond-fluctuation model. Surprisingly, the slithering…

统计力学 · 物理学 2009-11-07 L. Mattioni , J. P. Wittmer , J. Baschnagel , J. -L. Barrat , E. Luijten

This paper presents a full-spectrum Green function methodology (which is valid, in particular, at and around Wood-anomaly frequencies) for evaluation of scattering by periodic arrays of cylinders of arbitrary cross section-with application…

数值分析 · 数学 2017-04-12 Oscar P. Bruno , Agustin G. Fernandez-Lado

We revisit the classical problem of a polymer confined in a slit in both of its static and dynamic aspects. We confirm a number of well known scaling predictions and analyse their range of validity by means of comprehensive Molecular…

The dynamic structure factor of semiflexible polymers in solution is derived from the wormlike chain model. Special attention is paid to the rigid constraint of an inextensible contour and to the hydrodynamic interactions. For the cases of…

软凝聚态物质 · 物理学 2009-10-28 Klaus Kroy , Erwin Frey

The role of active stress on the conformational dynamics of a polymer has drawn significant interest due to its potential applications in understanding the energy landscape of protein structures, buckling of biopolymers, genomic spatial…

软凝聚态物质 · 物理学 2025-09-23 Arindam Panda , Sunil P Singh

Coupling between axial and torsional degrees of freedom often modifies the conformation and expression of natural and synthetic filamentous aggregates. Recent studies on chiral single-walled carbon nanotubes and B-DNA reveal a reversal in…

材料科学 · 物理学 2007-09-06 M. Upmanyu , H. L. Wang , H. Y. Liang , R. Mahajan

Polymers are an effective test-bed for studying topological constraints in condensed matter due to a wide array of synthetically-available chain topologies. When linear and ring polymers are blended together, emergent rheological properties…

软凝聚态物质 · 物理学 2024-04-25 Daniel L. Vigil , Ting Ge , Michael Rubinstein , Thomas C. O'Connor , Gary S. Grest

We study a blend of two kinds of homopolymers with tendency for segragation. Cross-links between the chains of different kinds do not allow macrophase separation. Instead microphase structure appears. Starting from a microscopic model we…

凝聚态物理 · 物理学 2007-05-23 C. D. Sfatos , A. M. Gutin , E. I. Shakhnovich

Unconcatenated, unknotted polymer rings in the melt are subject to strong interactions with neighboring chains due to the presence of topological constraints. We study this by computer simulation using the bond-fluctuation algorithm for…

统计力学 · 物理学 2009-10-31 M. Mueller , J. P. Wittmer , M. E. Cates