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Accurate intraoperative image guidance is critical for achieving maximal safe resection in brain tumor surgery, yet neuronavigation systems based on preoperative MRI lose accuracy during the procedure due to brain shift. Aligning…

The aim of this paper is to provide a comprehensive review of statistical challenges in neuroimaging data analysis from neuroimaging techniques to large-scale neuroimaging studies to statistical learning methods. We briefly review eight…

应用统计 · 统计学 2022-10-18 Hongtu Zhu , Tengfei Li , Bingxin Zhao

The reproducibility of scientific research has become a point of critical concern. We argue that openness and transparency are critical for reproducibility, and we outline an ecosystem for open and transparent science that has emerged…

计算机与社会 · 计算机科学 2018-09-27 Russell A. Poldrack , Krzysztof J. Gorgolewski , Gael Varoquaux

Combining Functional MRI (fMRI) data across different subjects and datasets is crucial for many neuroscience tasks. Relying solely on shared anatomy for brain-to-brain mapping is inadequate. Existing functional transformation methods thus…

神经元与认知 · 定量生物学 2025-03-18 Navve Wasserman , Roman Beliy , Roy Urbach , Michal Irani

Artificial Intelligence methods are powerful tools for biological image analysis and processing. High-quality annotated images are key to training and developing new methods, but access to such data is often hindered by the lack of…

Objective: This paper targets a major challenge in developing practical EEG-based brain-computer interfaces (BCIs): how to cope with individual differences so that better learning performance can be obtained for a new subject, with minimum…

机器学习 · 计算机科学 2019-04-03 He He , Dongrui Wu

Modern scientific fields face the challenge of integrating a wealth of data, analyses, and results. We recently showed that a neglect of this integration can lead to circular analyses and redundant explanations. Here, we help advance…

神经元与认知 · 定量生物学 2025-08-15 Mika Rubinov

A major data pre-processing step for large, multi-site studies is to handle site effects by harmonizing data, generating a dataset that enables more powerful analyses and more robust algorithms. There is a wide variety of data harmonization…

图像与视频处理 · 电气工程与系统科学 2024-10-28 Tom Osika , Ebrahim Ebrahim , Martin Styner , Marc Niethammer , Thomas Sawyer , Andinet Enquobahrie

Neuroscience research has expanded dramatically over the past 30 years by advancing standardization and tool development to support rigor and transparency. Consequently, the complexity of the data pipeline has also increased, hindering…

To build a robust and practical content-based image retrieval (CBIR) system that is applicable to a clinical brain MRI database, we propose a new framework -- Disease-oriented image embedding with pseudo-scanner standardization (DI-PSS) --…

计算机视觉与模式识别 · 计算机科学 2023-03-24 Hayato Arai , Yuto Onga , Kumpei Ikuta , Yusuke Chayama , Hitoshi Iyatomi , Kenichi Oishi

Deep learning has been recently used for the analysis of neuroimages, such as structural magnetic resonance imaging (MRI), functional MRI, and positron emission tomography (PET), and has achieved significant performance improvements over…

图像与视频处理 · 电气工程与系统科学 2020-05-12 Li Zhang , Mingliang Wang , Mingxia Liu , Daoqiang Zhang

Cognitive brain imaging is accumulating datasets about the neural substrate of many different mental processes. Yet, most studies are based on few subjects and have low statistical power. Analyzing data across studies could bring more…

机器学习 · 统计学 2021-05-20 Arthur Mensch , Julien Mairal , Bertrand Thirion , Gaël Varoquaux

The desire to train complex machine learning algorithms and to increase the statistical power in association studies drives neuroimaging research to use ever-larger datasets. The most obvious way to increase sample size is by pooling scans…

计算机视觉与模式识别 · 计算机科学 2020-10-29 Christian Wachinger , Anna Rieckmann , Sebastian Pölsterl

Utilizing multi-modal neuroimaging data has been proved to be effective to investigate human cognitive activities and certain pathologies. However, it is not practical to obtain the full set of paired neuroimaging data centrally since the…

计算机视觉与模式识别 · 计算机科学 2023-04-25 Jinbao Wang , Guoyang Xie , Yawen Huang , Jiayi Lyu , Yefeng Zheng , Feng Zheng , Yaochu Jin

Imitation learning is widely used for learning to act in complex environments. While pure neural-based methods handle high dimensional data effectively, they suffer from the requirement of large number of samples and are prone to…

机器学习 · 计算机科学 2026-05-11 Nikhilesh Prabhakar , Varun Balaji , Athresh Karanam , Kristian Kersting , Sriraam Natarajan

At this moment, databanks worldwide contain brain images of previously unimaginable numbers. Combined with developments in data science, these massive data provide the potential to better understand the genetic underpinnings of brain…

机器学习 · 统计学 2025-01-30 Santiago Silva , Boris Gutman , Eduardo Romero , Paul M Thompson , Andre Altmann , Marco Lorenzi

We introduce LITcoder, an open-source library for building and benchmarking neural encoding models. Designed as a flexible backend, LITcoder provides standardized tools for aligning continuous stimuli (e.g., text and speech) with brain…

计算与语言 · 计算机科学 2026-05-05 Taha Binhuraib , Ruimin Gao , Anna A. Ivanova

Biometric systems based on brain activity have been proposed as an alternative to passwords or to complement current authentication techniques. By leveraging the unique brainwave patterns of individuals, these systems offer the possibility…

密码学与安全 · 计算机科学 2024-07-12 Avinash Kumar Chaurasia , Matin Fallahi , Thorsten Strufe , Philipp Terhörst , Patricia Arias Cabarcos

Localizing neuronal activity in the brain, both in time and in space, is a central challenge to advance the understanding of brain function. Because of the inability of any single neuroimaging techniques to cover all aspects at once, there…

神经元与认知 · 定量生物学 2013-07-09 Yaroslav O. Halchenko , Michael Hanke , James V. Haxby , Stephen Jose Hanson , Christoph S. Herrmann

Biological visual systems learn from limited experience, unlike deep learning models that rely on millions of training images. What learning principles make this possible? We tested whether efficient coding, the idea that neural…

计算机视觉与模式识别 · 计算机科学 2026-05-20 Ananya Passi , Brian S. Robinson , Michael F. Bonner