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In microtubule-based active nematics, motor-driven extensile motion of microtubule bundles powers chaotic large-scale dynamics. We quantify the interfilament sliding motion both in isolated bundles and in a dense active nematic. The…

We consider the dynamics of a rigid filament in a motor protein assay under external loading. The motor proteins are modeled as active harmonic linkers with tail ends immobilized on a substrate. Their heads attach to the filament…

生物物理 · 物理学 2021-12-23 Amir Shee , Subhadip Ghosh , Debasish Chaudhuri

In the presence of ATP, molecular motors generate active force dipoles that drive suspensions of protein filaments far from thermodynamic equilibrium, leading to exotic dynamics and pattern formation. Microscopic modelling can help to…

生物物理 · 物理学 2015-06-17 D. A. Head , W. J. Briels , G. Gompper

Active materials are capable of converting free energy into directional motion, giving rise to striking dynamical phenomena. Developing a general understanding of their structure in relation to the underlying non-equilibrium physics would…

软凝聚态物质 · 物理学 2018-10-17 Nitin Kumar , Rui Zhang , Juan J. de Pablo , Margaret L. Gardel

Active matter comprises individual units that convert energy into mechanical motion. In many examples, such as bacterial systems and biofilament assays, constituent units are elongated and can give rise to local nematic orientational order.…

软凝聚态物质 · 物理学 2020-11-17 He Li , Xia-qing Shi , Mingji Huang , Xiao Chen , Mingfeng Xiao , Chenli Liu , Hugues Chate , H. P. Zhang

We model analytically the dynamics of a cytoskeletal filament in a motility assay. The filament is described as rigid rod free to slide in two dimensions. The motor proteins consist of polymeric tails tethered to the plane and modeled as…

统计力学 · 物理学 2015-03-19 Shiladitya Banerjee , M. Cristina Marchetti , Kristian Müller-Nedebock

Active gels are a class of biologically-relevant material containing embedded agents that spontaneously generate forces acting on a sparse filament network. In vitro experiments of protein filaments and molecular motors have revealed a…

软凝聚态物质 · 物理学 2024-06-03 David A. Head , Gerhard Gompper , W. J. Briels

We analyse the dynamics of overlapping antiparallel treadmilling microtubules in the presence of crosslinking processive motor proteins that counterbalance an external force. We show that coupling the force-dependent velocity of motors and…

软凝聚态物质 · 物理学 2015-05-30 Sudipto Muhuri , Ignacio Pagonabarraga , Jaume Casademunt

We analyze the stretching elasticity of a wormlike chain with a tension discontinuity resulting from a Hookean spring connecting its backbone to a fixed point. The elasticity of isolated semiflexible filaments has been the subject in a…

生物物理 · 物理学 2016-05-25 Mohammadhosein Razbin , Panayotis Benetatos , Annette Zippelius

The mechanical properties of cells are dominated by the cytoskeleton, an interconnected network of long elastic filaments. The connections between the filaments are provided by crosslinking proteins, which constitute, next to the filaments,…

软凝聚态物质 · 物理学 2012-10-09 Claus Heussinger

Networks of filamentous proteins play a crucial role in cell mechanics. These cytoskeletal networks, together with various crosslinking and other associated proteins largely determine the (visco)elastic response of cells. In this letter we…

无序系统与神经网络 · 物理学 2009-11-10 D. A. Head , A. J. Levine , F. C. MacKintosh

We study the influence of filament elasticity on the motion of collective molecular motors. It is found that for a backbone flexibility exceeding a characteristic value (motor stiffness divided through the mean displacement between attached…

软凝聚态物质 · 物理学 2007-05-23 Andrej Vilfan , Erwin Frey , Franz Schwabl

The production of mechanical stresses in living organisms largely relies on localized, force-generating active units embedded in filamentous matrices. Numerical simulations of discrete fiber networks with fixed boundaries have shown that…

生物物理 · 物理学 2018-05-10 Pierre Ronceray , Chase Broedersz , Martin Lenz

The spontaneous creation of disclinations is a defining characteristic of active nematics, which is rarely observed in equilibrium systems or other active matter systems. Thus, understanding the mechanics of disclinations is crucial for…

软凝聚态物质 · 物理学 2025-07-01 Yingyou Ma , Christopher Amey , Aparna Baskaran , Michael F. Hagan

We study a model of an active gel of cross-linked semiflexible filaments with additional active linkers such as myosin II clusters. We show that the coupling of the elasticity of the semiflexible filaments to the mechanical properties of…

软凝聚态物质 · 物理学 2009-11-13 T. B. Liverpool , M. C. Marchetti , J. -F. Joanny , J. Prost

Active nematics, formed from a liquid crystalline suspension of active force dipoles, are a paradigmatic active matter system whose study provides insights into how chemical driving produces the cellular mechanical forces essential for…

软凝聚态物质 · 物理学 2024-11-15 Carlos Floyd , Aaron R. Dinner , Suriyanarayanan Vaikuntanathan

Active filaments, such as microtubules with attached cargo-carrying motor proteins, are important dynamic structures for fluid transport in and around living cells. The mathematical models of active filaments appearing in the literature…

流体动力学 · 物理学 2025-08-19 Ilteber R. Ozdemir , Bethany Clarke , Yongyun Hwang , Eric E. Keaveny

Reconstituted filamentous actin networks with myosin motor proteins form active gels, in which motor proteins generate forces that drive the network far from equilibrium. This motor activity can also strongly affect the network elasticity;…

软凝聚态物质 · 物理学 2010-09-21 C. P. Broedersz , F. C. MacKintosh

We present a microscopic model of a disordered viscoelastic active solid, i.e. an active material whose long time behaviour is elastic as opposed to viscous. It is composed of filaments, passive crosslinks and molecular motors powered by…

软凝聚态物质 · 物理学 2014-07-15 Rhoda J. Hawkins , Tanniemola B. Liverpool

We describe the large-scale collective behavior of solutions of polar biofilaments and both stationary and mobile crosslinkers. Both mobile and stationary crosslinkers induce filament alignment promoting either polar or nematic order. In…

软凝聚态物质 · 物理学 2009-11-11 Aphrodite Ahmadi , M. Cristina Marchetti , T. B. Liverpool