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The task of locating first order saddle points on high-dimensional surfaces describing the variation of energy as a function of atomic coordinates is an essential step for identifying the mechanism and estimating the rate of thermally…

Gaussian process (GP) regression provides a strategy for accelerating saddle point searches on high-dimensional energy surfaces by reducing the number of times the energy and its derivatives with respect to atomic coordinates need to be…

化学物理 · 物理学 2025-12-03 Rohit Goswami , Hannes Jónsson

The saddle point (SP) calculation is a grand challenge for computationally intensive energy function in computational chemistry area, where the saddle point may represent the transition state (TS). The traditional methods need to evaluate…

机器学习 · 统计学 2022-11-08 Shuting Gu , Hongqiao Wang , Xiang Zhou

The theoretical investigation of gas adsorption, storage, separation, diffusion and related transport processes in porous materials relies on a detailed knowledge of the potential energy surface of molecules in a stationary environment. In…

化学物理 · 物理学 2025-01-30 Johannes K. Krondorfer , Christian W. Binder , Andreas W. Hauser

A common task is the determination of system parameters from spectroscopy, where one compares the experimental spectrum with calculated spectra, that depend on the desired parameters. Here we discuss an approach based on a machine learning…

量子物理 · 物理学 2022-05-04 Farhad Taher-Ghahramani , Fulu Zheng , Alexander Eisfeld

We employ Gaussian process (GP) regression to adjust for systematic errors in D3-type dispersion corrections introducing the associated, statistically improved model D3-GP. We generated a data set containing interaction energies for 1,248…

化学物理 · 物理学 2019-12-03 Jonny Proppe , Stefan Gugler , Markus Reiher

We implemented a gradient-based algorithm for transition state search which uses Gaussian process regression. Besides a description of the algorithm, we provide a method to find the starting point for the optimization if only the reactant…

化学物理 · 物理学 2020-09-15 Alexander Denzel , Johannes Kästner

We introduce a novel adaptive Gaussian Process Regression (GPR) methodology for efficient construction of surrogate models for Bayesian inverse problems with expensive forward model evaluations. An adaptive design strategy focuses on…

数值分析 · 数学 2024-05-01 Paolo Villani , Jörg Unger , Martin Weiser

A new algorithm is developed to tackle the issue of sampling non-Gaussian model parameter posterior probability distributions that arise from solutions to Bayesian inverse problems. The algorithm aims to mitigate some of the hurdles faced…

机器学习 · 统计学 2019-11-19 Leen Alawieh , Jonathan Goodman , John B. Bell

Gaussian Process Regression (GPR) is a Bayesian method for inferring profiles based on input data. The technique is increasing in popularity in the fusion community due to its many advantages over traditional fitting techniques including…

统计方法学 · 统计学 2022-09-07 Jarrod Leddy , Sandeep Madireddy , Eric Howell , Scott Kruger

We present a new program implementation of the gaussian process regression adaptive density-guided approach [J. Chem. Phys. 153 (2020) 064105] in the MidasCpp program. A number of technical and methodological improvements made allowed us to…

化学物理 · 物理学 2023-07-26 Denis G. Artiukhin , Ian H. Godtliebsen , Gunnar Schmitz , Ove Christiansen

Diffusion models generate data by learning to reverse a forward process, where samples are progressively perturbed with Gaussian noise according to a predefined noise schedule. From a geometric perspective, each noise schedule corresponds…

图像与视频处理 · 电气工程与系统科学 2025-10-21 Teng Zhang , Hongxu Jiang , Kuang Gong , Wei Shao

We formulate a reduced-order strategy for efficiently forecasting complex high-dimensional dynamical systems entirely based on data streams. The first step of our method involves reconstructing the dynamics in a reduced-order subspace of…

数据分析、统计与概率 · 物理学 2017-03-08 Zhong Yi Wan , Themistoklis P. Sapsis

Bayesian models based on Gaussian processes (GPs) offer a flexible framework to predict spatially distributed variables with uncertainty. But the use of nonstationary priors, often necessary for capturing complex spatial patterns, makes…

机器学习 · 统计学 2025-06-02 Gabriel V Cardoso , Mike Pereira

We show that Gaussian process regression (GPR) allows representing multivariate functions with low-dimensional terms via kernel design. When using a kernel built with HDMR (High-dimensional model representation), one obtains a similar type…

数值分析 · 数学 2023-01-27 Eita Sasaki , Manabu Ihara , Sergei Manzhos

Gaussian processes are probabilistic models that are commonly used as functional priors in machine learning. Due to their probabilistic nature, they can be used to capture the prior information on the statistics of noise, smoothness of the…

统计计算 · 统计学 2024-02-02 Ahmad Farooq , Cristian A. Galvis-Florez , Simo Särkkä

This work presents a novel method for extracting potential barrier distributions from experimental fusion cross sections. We utilize a simple Gaussian process regression (GPR) framework to model the observed cross sections as a function of…

核理论 · 物理学 2024-06-10 Kyle Godbey

Diffusion models offer stable training and state-of-the-art performance for deep generative modeling tasks. Here, we consider their use in the context of multivariate subsurface modeling and probabilistic inversion. We first demonstrate…

计算机视觉与模式识别 · 计算机科学 2026-01-28 Roberto Miele , Niklas Linde

We present a new efficient transition pathway search method based on the least action principle and the Gaussian process regression method. Most pathway search methods developed so far rely on string representations, which approximate a…

计算物理 · 物理学 2022-09-13 JaeHwan Shim , Juyong Lee , Jaejun Yu

Gaussian process tomography (GPT) is a method used for obtaining real-time tomographic reconstructions of the plasma emissivity profile in a tokamak, given some model for the underlying physical processes involved. GPT can also be used,…

数据分析、统计与概率 · 物理学 2020-12-02 Francisco Matos , Jakob Svensson , Andrea Pavone , Tomas Odstrcil , Frank Jenko
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