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Pollen grains are known for their impressive variety of species-specific, microscale surface patterning. Despite having similar biological developmental steps, pollen grain surface features are remarkably geometrically varied. Previous work…

软凝聚态物质 · 物理学 2019-02-15 Asja Radja , Eric M. Horsley , Maxim O. Lavrentovich , Alison M. Sweeney

Spatiotemporal patterns are common in biological systems. For electrically-coupled cells previous studies of pattern formation have mainly used external forcing as the main bifurcation parameter. The purpose of this paper is to show that…

动力系统 · 数学 2021-11-02 H. O. Fatoyinbo , R. G. Brown , D. J. W. Simpson , B. van Brunt

A curious feature of organ and organoid morphogenesis is that in certain cases, spatial oscillations in the thickness of the growing "film" are out-of-phase with the deformation of the slower-growing "substrate," while in other cases, the…

生物物理 · 物理学 2018-12-26 T. A. Engstrom , Teng Zhang , A. K. Lawton , A. L. Joyner , J. M. Schwarz

We study a reaction-diffusion equation with an integral term describing nonlocal consumption of resources. We show that a homogeneous equilibrium can lose its stability resulting in appearance of stationary spatial structures. It is a new…

偏微分方程分析 · 数学 2007-05-23 Stephane Genieys , Vitaly Volpert , Pierre Auger

MicroRNAs are extensively known for post-transcriptional gene regulation and pattern formation in the embryonic developmental stage. We explore the origin of these spatio-temporal patterns mathematically, considering three different motifs…

定量方法 · 定量生物学 2023-07-19 Priya Chakraborty , Sayantari Ghosh

We study diffusion-driven pattern-formation in networks of networks, a class of multilayer systems, where different layers have the same topology, but different internal dynamics. Agents are assumed to disperse within a layer by undergoing…

物理与社会 · 物理学 2018-03-28 Andreas Brechtel , Philipp Gramlich , Daniel Ritterskamp , Barbara Drossel , Thilo Gross

Enhancement of the predictive power and robustness of nonlinear population dynamics models allows ecologists to make more reliable forecasts about species' long term survival. However, the limited availability of detailed ecological data,…

斑图形成与孤子 · 物理学 2025-04-18 Indrajyoti Gaine , Malay Banerjee

Reaction-diffusion systems have been widely used to study spatio-temporal phenomena in cell biology, such as cell polarization. Coupled bulk-surface models naturally include compartmentalization of cytosolic and membrane-bound polarity…

斑图形成与孤子 · 物理学 2020-08-11 Frédéric Paquin-Lefebvre , Bin Xu , Kelsey L. DiPietro , Alan E. Lindsay , Alexandra Jilkine

Mathematical models of spatial population dynamics typically focus on the interplay between dispersal events and birth/death processes. However, for many animal communities, significant arrangement in space can occur on shorter timescales,…

种群与进化 · 定量生物学 2019-06-06 Jonathan R. Potts , Mark A. Lewis

Background: Mechanotransduction in bone cells plays a pivotal role in osteoblast differentiation and bone remodelling. Mechanotransduction provides the link between modulation of the extracellular matrix and intracellular actions. By…

亚细胞过程 · 定量生物学 2019-02-26 Gianluca Ascolani , Timothy M. Skerry , Damien Lacroix , Enrico Dall'Ara , Aban Shuaib

Phase separation of a liquid mixture embedded within an elastic network is relevant to a wide range of natural and industrial systems, including biomolecular condensates interacting with the cytoskeleton, structural colouring in bird…

软凝聚态物质 · 物理学 2025-08-14 Oliver W. Paulin , Yicheng Qiang , David Zwicker

Cell plasma membranes display a dramatically rich structural complexity characterized by functional sub-wavelength domains with specific lipid and protein composition. Under favorable experimental conditions, patterned morphologies can also…

软凝聚态物质 · 物理学 2018-10-02 Nicolas Destainville , Manoel Manghi , Julie Cornet

Coupling diffusion process of signaling molecules with nonlinear interactions of intracellular processes and cellular growth/transformation leads to a system of reaction-diffusion equations coupled with ordinary differential equations…

偏微分方程分析 · 数学 2013-11-08 Anna Marciniak-Czochra , Madoka Nakayama , Izumi Takagi

We use a combination of unsupervised clustering and sparsity-promoting inference algorithms to learn locally dominant force balances that explain macroscopic pattern formation in self-organized active particle systems. The self-organized…

软凝聚态物质 · 物理学 2023-07-28 Dominik Sturm , Suryanarayana Maddu , Ivo F. Sbalzarini

We consider a reaction-diffusion system with discontinuous reaction terms modeled by non-ideal relays. The system is motivated by an epigenetic population model of evolution of two-phenotype bacteria which switch phenotype in response to…

偏微分方程分析 · 数学 2014-11-04 Pavel Gurevich , Dmitrii Rachinskii

The growth of a crystal is usually determined by its surface. Many factors influence the growth dynamics. Energy barriers associated with the presence of steps most often decide about the emerging pattern. The height and type of…

材料科学 · 物理学 2023-12-08 Marta Anna Chabowska , Magdalena A. Załuska-Kotur

An important component in studying mathematical models in many biochemical systems, such as those found in developmental biology, is phase transition. The purpose of this work is to analyze the phase transition property of a…

偏微分方程分析 · 数学 2013-12-19 Masoud Yari

Shapes of biological membranes are dynamically regulated in living cells. Although membrane shape deformation by proteins at thermal equilibrium has been extensively studied, nonequilibrium dynamics have been much less explored. Recently,…

生物物理 · 物理学 2020-11-19 Naoki Tamemoto , Hiroshi Noguchi

Dispersal is a well recognized driver of ecological and evolutionary dynamics, and simultaneously an evolving trait. Dispersal evolution has traditionally been studied in single-species metapopulations so that it remains unclear how…

We present a generic mechanism by which reproducing microorganisms, with a diffusivity that depends on the local population density, can form stable patterns. It is known that a decrease of swimming speed with density can promote separation…

种群与进化 · 定量生物学 2010-07-13 M. E. Cates , D. Marenduzzo , I. Pagonabarraga , J. Tailleur