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相关论文: Towards Unified AI Drug Discovery with Multiple Kn…

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Accurate prediction of Drug-Target Affinity (DTA) is crucial for reducing experimental costs and accelerating early screening in computational drug discovery. While sequence-based deep learning methods avoid reliance on costly 3D…

机器学习 · 计算机科学 2025-11-03 Minghui Li , Yuanhang Wang , Peijin Guo , Wei Wan , Shengshan Hu , Shengqing Hu

Multimodal foundation models have demonstrated impressive capabilities across diverse tasks. However, their potential as plug-and-play solutions for missing modality reconstruction remains underexplored. To bridge this gap, we identify and…

多媒体 · 计算机科学 2026-05-25 Guanzhou Ke , Bo Wang , Guoqing Chao , Weiming Hu , Shengfeng He

Recent breakthroughs in generative modeling have demonstrated remarkable capabilities in molecular generation, yet the integration of comprehensive biomedical knowledge into these models has remained an untapped frontier. In this study, we…

机器学习 · 计算机科学 2025-10-14 Aditya Malusare , Vineet Punyamoorty , Vaneet Aggarwal

Recently, the embedding-based recommendation models (e.g., matrix factorization and deep models) have been prevalent in both academia and industry due to their effectiveness and flexibility. However, they also have such intrinsic…

信息检索 · 计算机科学 2019-12-19 Yuan Zhang , Xiaoran Xu , Hanning Zhou , Yan Zhang

The rise in loosely-structured data available through text, images, and other modalities has called for new ways of querying them. Multimedia Information Retrieval has filled this gap and has witnessed exciting progress in recent years.…

多媒体 · 计算机科学 2024-01-31 Giovanni Trappolini , Andrea Santilli , Emanuele Rodolà , Alon Halevy , Fabrizio Silvestri

Feature matching is a cornerstone task in computer vision, essential for applications such as image retrieval, stereo matching, 3D reconstruction, and SLAM. This survey comprehensively reviews modality-based feature matching, exploring…

计算机视觉与模式识别 · 计算机科学 2025-07-31 Weide Liu , Wei Zhou , Jun Liu , Ping Hu , Jun Cheng , Jungong Han , Weisi Lin

Existing anomaly detection (AD) methods often treat the modality and class as independent factors. Although this paradigm has enriched the development of AD research branches and produced many specialized models, it has also led to…

计算机视觉与模式识别 · 计算机科学 2026-03-17 Yuan Zhao , Youwei Pang , Lihe Zhang , Hanqi Liu , Jiaming Zuo , Huchuan Lu , Xiaoqi Zhao

The clinical trial is a pivotal and costly process, often spanning multiple years and requiring substantial financial resources. Therefore, the development of clinical trial outcome prediction models aims to exclude drugs likely to fail and…

机器学习 · 计算机科学 2025-01-29 Wenhao Zheng , Liaoyaqi Wang , Dongshen Peng , Hongxia Xu , Yun Li , Hongtu Zhu , Tianfan Fu , Huaxiu Yao

Precision medicine is a promising approach for accessible disease diagnosis and personalized intervention planning in high-mortality diseases such as coronary artery disease (CAD), drug-resistant epilepsy (DRE), and chronic illnesses like…

计算机视觉与模式识别 · 计算机科学 2024-11-19 Ayan Banerjee , Payal Kamboj , Sandeep Gupta

The accurate screening of candidate drug ligands against target proteins through computational approaches is of prime interest to drug development efforts. Such virtual screening depends in part on methods to predict the binding affinity…

机器学习 · 计算机科学 2024-10-22 Ho-Joon Lee , Prashant S. Emani , Mark B. Gerstein

Multimodal learning has become a pivotal approach in developing robust learning models with applications spanning multimedia, robotics, large language models, and healthcare. The efficiency of multimodal systems is a critical concern, given…

机器学习 · 计算机科学 2025-03-04 Zhe Gao , Jian Huang , Ting Li , Xueqin Wang

Multimodal clinical prediction faces three challenges: multiple foundation models (FMs) with complementary strengths per modality, pervasive missing modalities at training and test time, and sample-specific variation in modality…

机器学习 · 计算机科学 2026-05-19 Seungik Cho , Anqi Li , Wei Qiu

Learning neural subset selection tasks, such as compound selection in AI-aided drug discovery, have become increasingly pivotal across diverse applications. The existing methodologies in the field primarily concentrate on constructing…

机器学习 · 计算机科学 2024-06-11 Binghui Xie , Yatao Bian , Kaiwen zhou , Yongqiang Chen , Peilin Zhao , Bo Han , Wei Meng , James Cheng

This paper explores the tasks of leveraging auxiliary modalities which are only available at training to enhance multimodal representation learning through cross-modal Knowledge Distillation (KD). The widely adopted mutual information…

计算机视觉与模式识别 · 计算机科学 2023-06-14 Mengxi Chen , Linyu Xing , Yu Wang , Ya Zhang

Drug discovery remains a slow and expensive process that involves many steps, from detecting the target structure to obtaining approval from the Food and Drug Administration (FDA), and is often riddled with safety concerns. Accurate…

定量方法 · 定量生物学 2025-08-22 Ali Vefghi , Zahed Rahmati , Mohammad Akbari

Advances in deep learning have opened an era of abundant and accurate predicted protein structures; however, similar progress in protein ensembles has remained elusive. This review highlights several recent research directions towards…

生物大分子 · 定量生物学 2025-09-23 Bowen Jing , Bonnie Berger , Tommi Jaakkola

We present a modular framework powered by large language models (LLMs) that automates and streamlines key tasks across the early-stage computational drug discovery pipeline. By combining LLM reasoning with domain-specific tools, the…

Combinatorial optimization algorithm is essential in computer-aided drug design by progressively exploring chemical space to design lead compounds with high affinity to target protein. However current methods face inherent challenges in…

生物大分子 · 定量生物学 2025-07-23 Hao Tuo , Yan Li , Xuanning Hu , Haishi Zhao , Xueyan Liu , Bo Yang

Multimodal learning that integrates genomics and histopathology has shown strong potential in cancer diagnosis, yet its clinical translation is hindered by the limited availability of paired histology-genomics data. Knowledge distillation…

计算机视觉与模式识别 · 计算机科学 2026-03-25 Yongxin Guo , Hao Lu , Onur C. Koyun , Zhengjie Zhu , Muhammet Fatih Demir , Metin Nafi Gurcan

With the exponential surge in diverse multi-modal data, traditional uni-modal retrieval methods struggle to meet the needs of users seeking access to data across various modalities. To address this, cross-modal retrieval has emerged,…

信息检索 · 计算机科学 2024-10-01 Tianshi Wang , Fengling Li , Lei Zhu , Jingjing Li , Zheng Zhang , Heng Tao Shen
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