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We modify the standard Vicsek model to clearly distinguish between intrinsic noise due to imperfect alignment between organisms, and extrinsic noise due to fluid motion. We then consider the effect of a steady vortical flow, the Taylor…

生物物理 · 物理学 2015-06-11 Andrew W. Baggaley

In open water, social fish gather to form schools, in which fish generally align with each other. In this work, we study how this social behavior evolves when perturbed by artificial obstacles. We measure the collective behavior of a group…

We study the stability of the ordered phase of flocking models with a scalar order parameter. Using both the active Ising model and a hydrodynamic description, we show that droplets of particles moving in the direction opposite to that of…

Self-propelled particles with hydrodynamic interactions (microswimmers) have previously been shown to produce long-range ordering phenomena. Many theoretical explanations for these collective phenomena are connected to instabilities in the…

软凝聚态物质 · 物理学 2017-05-03 Yuzhou Qian , Peter R. Kramer , Patrick T. Underhill

In this Letter, we study the collective behaviour of a large number of self-propelled microswimmers immersed in a fluid. Using unprecedently large-scale lattice Boltzmann simulations, we reproduce the transition to bacterial turbulence. We…

软凝聚态物质 · 物理学 2017-07-17 Joakim Stenhammar , Cesare Nardini , Rupert W. Nash , Davide Marenduzzo , Alexander Morozov

We numerically examine a bidisperse system of active and passive particles coupled to a resource substrate. The active particles deplete the resource at a fixed rate and move toward regions with higher resources, while all of the particles…

软凝聚态物质 · 物理学 2024-04-23 L. Varga , A. Libal , C. Reichhardt , C. J. O. Reichhardt

We consider an active Ising model in which spins both diffuse and align on lattice in one and two dimensions. The diffusion is biased so that plus or minus spins hop preferably to the left or to the right, which generates a flocking…

统计力学 · 物理学 2013-09-09 A. Solon , J. Tailleur

Despite their inherent non-equilibrium nature, living systems can self-organize in highly ordered collective states that share striking similarities with the thermodynamic equilibrium phases of conventional condensed matter and fluid…

软凝聚态物质 · 物理学 2016-05-04 Hugo Wioland , Francis G. Woodhouse , Jörn Dunkel , Raymond E. Goldstein

We study a collection of self-propelled polar particles on a two-dimensional substrate with birth and death. We introduce a minimal lattice model for the system using active Ising spins, where each particle can have two possible…

软凝聚态物质 · 物理学 2022-05-10 Pawan Kumar Mishra , Shradha Mishra

A major puzzle in biology is how mammalian sperm determine and maintain the correct swimming direction during the various phases of the sexual reproduction process. Whilst chemotaxis is assumed to dominate in the immediate vicinity of the…

生物物理 · 物理学 2014-05-27 Vasily Kantsler , Jörn Dunkel , Martyn Blayney , Raymond E. Goldstein

We examine the motion of rigid, ellipsoidal swimmers subjected to a steady vortex flow in two dimensions. Numerical simulations of swimmers in a spatially periodic array of vortices reveal a range of possible behaviors, including trapping…

混沌动力学 · 物理学 2020-08-11 S. A. Berman , K. A. Mitchell

Geometric confinement plays an important role in the dynamics of natural and synthetic microswimmers from bacterial cells to self-propelled particles in high-throughput microfluidic devices. However, little is known about the effects of…

流体动力学 · 物理学 2014-11-13 Alan Cheng Hou Tsang , Eva Kanso

We study theoretically the effects of confinement on active polar gels such as the actin network of eukaryotic cells. Using generalized hydrodynamics equations derived for active gels, we predict, in the case of quasi one-dimensional…

亚细胞过程 · 定量生物学 2015-06-26 R. Voituriez , J-F Joanny , J. Prost

Sperm cooperation has evolved in a variety of taxa and is often considered a response to sperm competition, yet the benefit of this form of collective movement remains unclear. Here we use fine-scale imaging and a minimal mathematical model…

细胞行为 · 定量生物学 2014-07-03 H. S. Fisher , L. Giomi , H. E. Hoekstra , L. Mahadevan

In biological tissues, it is now well-understood that mechanical cues are a powerful mechanism for pattern regulation. While much work has focused on interactions between cells and external substrates, recent experiments suggest that cell…

软凝聚态物质 · 物理学 2017-11-01 Michael Czajkowski , Dapeng Bi , M. Lisa Manning , M. Cristina Marchetti

Flocking is a prime example of how robust collective behavior can emerge from simple interaction rules. The flocking transition has been studied extensively since the inception of the original Vicsek model. Here, we introduce a novel…

软凝聚态物质 · 物理学 2024-09-18 Eloise Lardet , Raphaël Voituriez , Silvia Grigolon , Thibault Bertrand

We study the role of noise on the nature of the transition to collective motion in dry active matter. Starting from field theories that predict a continuous transition at the deterministic level, we show that fluctuations induce a…

Collective behavior occurs ubiquitously in nature and it plays a key role in bacterial colonies, mammalian cells or flocks of birds. Here, we examine the average density and velocity of self-propelled particles, which are described by a…

统计力学 · 物理学 2022-03-29 C. Trenado , L. L. Bonilla , A. Marquina

The ocean is teeming with a myriad of mm-sized invertebrate planktonic larvae, which thrive in a viscous fluid environment. Many of them rely on ciliary beating to generate fluid flows for locomotion and feeding. Their larval forms, local…

We study the collective dynamics of elongated swimmers in a very thin fluid layer by devising long, filamentous, non-tumbling bacteria. The strong confinement induces weak nematic alignment upon collision, which, for large enough density of…

统计力学 · 物理学 2017-02-22 Daiki Nishiguchi , Ken H. Nagai , Hugues Chaté , Masaki Sano