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Computational models of collective behavior in birds has allowed us to infer interaction rules directly from experimental data. Using a generic form of these rules we explore the collective behavior and emergent dynamics of a simulated…

适应与自组织系统 · 物理学 2012-07-24 Michael Small , Xiaoke Xu

Sperm swimming at low Reynolds number have strong hydrodynamic interactions when their concentration is high in vivo or near substrates in vitro. The beating tails not only propel the sperm through a fluid, but also create flow fields…

生物物理 · 物理学 2009-01-09 Yingzi Yang , Jens Elgeti , Gerhard Gompper

Melting of two-dimensional (2D) equilibrium crystals, from superconducting vortex lattices to colloidal structures, is a complex phenomenon characterized by the sequential loss of positional and orientational order. Whereas melting…

软凝聚态物质 · 物理学 2021-10-27 Martin James , Dominik Anton Suchla , Jörn Dunkel , Michael Wilczek

We study the large-time behavior of hydrodynamic model which describes the collective behavior of continuum of agents, driven by pairwise alignment interactions with additional external potential forcing. The external force tends to compete…

偏微分方程分析 · 数学 2020-07-15 Ruiwen Shu , Eitan Tadmor

We introduce a family of lattice-gas models of flocking, whose thermodynamically consistent dynamics admits a proper equilibrium limit at vanishing self-propulsion. These models are amenable to an exact coarse-graining which allows us to…

统计力学 · 物理学 2024-09-27 Tal Agranov , Robert L. Jack , Michael E. Cates , Étienne Fodor

We model an enclosed system of bacteria, whose motility-induced phase separation is coupled to slow population dynamics. Without noise, the system shows both static phase separation and a limit cycle, in which a rising global population…

统计力学 · 物理学 2017-11-08 Tobias Grafke , Michael E. Cates , Eric Vanden-Eijnden

In this fluid dynamics video we explore the nature and causes of the spontaneous ordering that emerges in a dense bacterial suspension under confinement. Recent experiments with B. Subtilis confined within small flattened drops show that…

软凝聚态物质 · 物理学 2013-10-14 Hugo Wioland , Enkeleida Lushi , Raymond E. Goldstein

We investigate the collective behavior of motile rods immersed in a monolayer of apolar rods confined between vertically vibrating plates using numerical simulations. We uncover an antidiffusive instability whereby motile rods segregate…

软凝聚态物质 · 物理学 2026-03-12 Abhishek Sharma , Harsh Soni

Spontaneous emergence of correlated states such as flocks and vortices are prime examples of remarkable collective dynamics and self-organization observed in active matter. The formation of globally correlated polar states in geometrically…

软凝聚态物质 · 物理学 2022-01-10 Bo Zhang , Hang Yuan , Andrey Sokolov , Monica Olvera de la Cruz , Alexey Snezhko

Non-equilibrium active matter made up of self-driven particles with short-range repulsive interactions is a useful minimal system to study active matter as the system exhibits collective motion and nonequilibrium order-disorder transitions.…

软凝聚态物质 · 物理学 2016-01-06 Hui-Shun Kuan , Robert Blackwell , Loren E. Hough , Matthew A. Glaser , M. D. Betterton

The collective behavior of active semiflexible filaments is studied with a model of tangentially driven self-propelled worm-like chains. The combination of excluded-volume interactions and self-propulsion leads to several distinct dynamic…

生物物理 · 物理学 2024-06-03 Ozer Duman , Rolf E. Isele-Holder , Jens Elgeti , Gerhard Gompper

Collective locomotion of swimming and flying animals is fascinating in terms of individual-level fluid mechanics and group-level structure and dynamics. Here we bridge and relate these scales through a model of formation flight that views…

流体动力学 · 物理学 2025-06-18 Christiana Mavroyiakoumou , Jiajie Wu , Leif Ristroph

We study a model of flocking in order to describe the transitions during the collective motion of organisms in three dimensions (e.g., birds). In this model the particles representing the organisms are self-propelled, i.e., they move with…

生物物理 · 物理学 2015-06-26 A. Czirok , M. Vicsek , T. Vicsek

We study the long-time hydrodynamic behavior of systems of multi-species which arise from agent-based description of alignment dynamics. The interaction between species is governed by an array of symmetric communication kernels. We prove…

偏微分方程分析 · 数学 2022-09-07 Jingcheng Lu , Eitan Tadmor

There are rich emergent phase behaviors in non-equilibrium active systems. Flocking and clustering are two representative dynamic phases. The relationship between these two phases is still unclear. In the paper, we numerically investigate…

软凝聚态物质 · 物理学 2023-08-09 Lu Chen , Bokai Zhang , Z. C. Tu

In active matter systems, self-propelled particles can self-organize to undergo collective motion, leading to persistent dynamical behavior out of equilibrium. In cells, cytoskeletal filaments and motor proteins self-organize into complex…

软凝聚态物质 · 物理学 2020-05-19 Jeffrey M. Moore , Tyler N. Thompson , Matthew A. Glaser , Meredith D. Betterton

How fast must an oriented collection of extensile swimmers swim to escape the instability of viscous active suspensions? We show that the answer lies in the dimensionless combination $R=\rho v_0^2/2\sigma_a$, where $\rho$ is the suspension…

软凝聚态物质 · 物理学 2021-11-09 Rayan Chatterjee , Navdeep Rana , R. Aditi Simha , Prasad Perlekar , Sriram Ramaswamy

Flocking phase transitions found in models of polar active matter are paradigmatic examples of active phase transitions in soft matter. An interesting specialization of flocking models concerns a ``topological'' vs ``metric'' choice by…

软凝聚态物质 · 物理学 2024-09-10 Charles R. Packard , Daniel M. Sussman

Birds in a flock move in a correlated way, resulting in large polarization of velocities. A good understanding of this collective behavior exists for linear motion of the flock. Yet observing actual birds, the center of mass of the group…

Shape anisotropy of individual building blocks plays a crucial role in creating exotic structures and controlling phase behavior in equilibrium systems. We present a combined experimental and simulation study in which we used light-driven…

软凝聚态物质 · 物理学 2026-05-05 Yogesh Shelke , Anpuj Nair S , Hanumantha Rao Vutukuri