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We systematically explore the self-assembly of semi-flexible polymers in deformable spherical confinement across a wide regime of chain stiffness, contour lengths and packing fractions by means of coarse-grained molecular dynamics…

软凝聚态物质 · 物理学 2021-07-12 Maxime M. C. Tortora , Daniel Jost

Motivated by the structure of networks of cross-linked cytoskeletal biopolymers, we study the orientationally ordered phases in two-dimensional networks of randomly cross-linked semiflexible polymers. We consider permanent cross-links which…

软凝聚态物质 · 物理学 2011-03-08 Martin Kiemes , Panayotis Benetatos , Annette Zippelius

A self-interacting polymer can undergo an orientational ordering transition, depending on the magnitude of the nematic interaction. The effect of embedding such a polymer into a flexible surface on this transition is studied on the…

凝聚态物理 · 物理学 2009-10-28 Rudolf Podgornik

The nematic ordering in semiflexible polymers with contour length $L$ exceeding their persistence length $\ell_p$ is described by a confinement of the polymers in a cylinder of radius $r_{eff}$ much larger than the radius $r_\rho$, expected…

软凝聚态物质 · 物理学 2016-05-11 Sergei A. Egorov , Andrey Milchev , Kurt Binder

We theoretically study the nematic ordering transition of rods that are able to elastically adjust their mutually excluded volumes. The model rods, which consist of a hard core surrounded by a deformable shell, mimic the structure of…

软凝聚态物质 · 物理学 2009-11-11 K. Shundyak , R. van Roij , P. van der Schoot

Through extensive Monte Carlo simulations, we systematically study the effect of chain stiffness on the packing ability of linear polymers composed of hard spheres in extremely confined monolayers, corresponding effectively to 2D films.…

Semiflexible polymers in concentrated lyotropic solution are studied within a bead-spring model by molecular dynamics simulations, focusing on the emergence of a smectic A phase and its properties. We systematically vary the density of the…

软凝聚态物质 · 物理学 2019-01-28 Andrey Milchev , Arash Nikoubashman , Kurt Binder

The ordering of rod-like particles in soft, deformable containers emerges from the interplay of anisotropic interactions, geometric confinement, and boundary compliance. This competition couples internal particle organization to container…

软凝聚态物质 · 物理学 2026-05-22 Stijn van der Ham , André F. V. Matias , Marjolein Dijkstra , Hanumantha Rao Vutukuri

We use a series of molecular dynamics simulations, and analytical theory, to demonstrate that a system of hard spheres confined to a narrow cylindrical channel exhibits a continuous phase transition from an isotropic fluid at low densities,…

软凝聚态物质 · 物理学 2014-09-18 Mahdi Zaeifi Yamchi , Richard K. Bowles

We report the discovery of a mixed orientational structure in the quasi-one-dimensional fluid of hard non-spherical bodies with the exact calculation of the thermodynamic and structural quantities using the transfer operator method. The…

软凝聚态物质 · 物理学 2025-10-13 Sakineh Mizani , Martin Oettel , Péter Gurin , Szabolcs Varga

In vivo and in vitro systems of cells and extra-cellular matrix (ECM) systems are well known to form ordered patterns of orientationally aligned fibers. Here, we interpret them as active analogs of the (disordered) isotropic to the…

软凝聚态物质 · 物理学 2025-04-11 Haiqian Yang , Ming Guo , L. Mahadevan

To enlighten the nature of the order-disorder and order-order transitions in block copolymer melts confined in narrow capillaries we analyze peculiarities of the conventional Landau weak crystallization theory of systems confined to…

软凝聚态物质 · 物理学 2011-11-09 Igor Erukhimovich , Albert Johner

Colloids self-assemble into various organized superstructures determined by particle interactions. There is a tremendous progress in both the scientific understanding and applications of self-assemblies of single-type identical particles.…

软凝聚态物质 · 物理学 2016-09-23 Chenhui Peng , Taras Turiv , Yubing Guo , Sergij V. Shiyanovskii , Qi-Huo Wei , Oleg D. Lavrentovich

We use molecular dynamics to study the ordering of a nematic liquid crystal around a spherical particle or droplet. Homeotropic boundary conditions and strong anchoring create a hedgehog director configuration on the particle surface and in…

软凝聚态物质 · 物理学 2013-03-19 D. Andrienko , G. Germano , M. P. Allen

We investigate the tight packing of nematic polymers inside a confining hard sphere. We model the polymer {\sl via} the continuum Frank elastic free energy augmented by a simple density dependent part as well as by taking proper care of the…

软凝聚态物质 · 物理学 2010-05-05 Daniel Svenšek , Gregor Veble , Rudolf Podgornik

Liquid crystals can self-organize into a layered smectic phase. While the smectic layers are typically straight forming a lamellar pattern in bulk, external confinement may drastically distort the layers due to the boundary conditions…

Conformations of a single semiflexible polymer chain dissolved in a low molecular weight liquid crystalline solvents (nematogens) are examined by using a mean field theory. We takes into account a stiffness and partial orientational…

软凝聚态物质 · 物理学 2009-11-07 Akihiko Matsuyama

Vertically vibrated rod-shaped granular materials confined to quasi-2D containers self organize into distinct patterns. We find, consistent with theory and simulation, a density dependent isotropic-nematic transition. Along the walls, rods…

软凝聚态物质 · 物理学 2009-11-11 J. Galanis , D. Harries , D. L. Sackett , W. Losert , R. Nossal

We propose a general formalism to characterize orientational frustration of smectic liquid crystals in confinement by interpreting the emerging networks of grain boundaries as objects with a topological charge. In a formal idealization,…

A Self Consistent Field Theory description of equilibrium, but non uniform, configurations adopted by semi flexible liquid crystal molecules is presented. Two cases are considered, isotropic-nematic phase boundaries, and topological defects…

软凝聚态物质 · 物理学 2025-03-03 Longyu Qing , Jorge Viñals
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