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Over the past few years, deep learning methods have been applied for a wide range of Software Engineering (SE) tasks, including in particular for the important task of automatically predicting and localizing faults in software. With the…

软件工程 · 计算机科学 2024-02-09 Adil Mukhtar , Dietmar Jannach , Franz Wotawa

Replication of scientific experiments is critical to the advance of science. Unfortunately, the discipline of Computer Science has never treated replication seriously, even though computers are very good at doing the same thing over and…

综合文献 · 计算机科学 2013-04-15 Ian P. Gent

Reproducibility of computational studies is a hallmark of scientific methodology. It enables researchers to build with confidence on the methods and findings of others, reuse and extend computational pipelines, and thereby drive scientific…

With the recognized crisis of credibility in scientific research, there is a growth of reproducibility studies in computer science, and although existing surveys have reviewed reproducibility from various perspectives, especially very…

软件工程 · 计算机科学 2023-12-19 José Armando Hernández , Miguel Colom

A reproducibility crisis has been reported in science, but the extent to which it affects AI research is not yet fully understood. Therefore, we performed a systematic replication study including 30 highly cited AI studies relying on…

人工智能 · 计算机科学 2024-12-25 Odd Erik Gundersen , Odd Cappelen , Martin Mølnå , Nicklas Grimstad Nilsen

Reproducibility is widely acknowledged as a fundamental principle in scientific research. Currently, the scientific community grapples with numerous challenges associated with reproducibility, often referred to as the ''reproducibility…

软件工程 · 计算机科学 2024-09-16 Benjamin A. Antunes , David R. C. Hill

Computational reproducibility, the possibility for independent researchers to exactly reproduce published empirical results, is fundamental to science. Despite its importance, the proportion of research articles aiming for reproducibility…

Making data compliant with the FAIR Data principles (Findable, Accessible, Interoperable, Reusable) is still a challenge for many researchers, who are not sure which criteria should be met first and how. Illustrated from experimental data…

其他定量生物学 · 定量生物学 2020-12-18 Daniel Jacob , Romain David , Sophie Aubin , Yves Gibon

Science has a data management problem, as well as a project management problem. While industrial-grade data science teams have embraced the agile mindset, and adopted or created all kind of tools to create reproducible workflows,…

计算机与社会 · 计算机科学 2022-07-05 Juan Julián Merelo-Guervós , Mario García-Valdez

With the advent of open source software, a veritable treasure trove of previously proprietary software development data was made available. This opened the field of empirical software engineering research to anyone in academia. Data that is…

软件工程 · 计算机科学 2022-04-19 Adam Tutko , Austin Z. Henley , Audris Mockus

Scientific software projects evolve rapidly in their initial development phase, yet at the end of a funding period, the completion of a research project, thesis, or publication, further engagement in the project may slow down or cease…

综合文献 · 计算机科学 2021-05-10 Jörg Fehr , Christian Himpe , Stephan Rave , Jens Saak

In recent years, the research community, but also the general public, has raised serious questions about the reproducibility and replicability of scientific work. Since many studies include some kind of computational work, these issues are…

软件工程 · 计算机科学 2025-03-14 Lázaro Costa , Susana Barbosa , Jácome Cunha

Scientific workflow has become essential in software engineering because it provides a structured approach to designing, executing, and analyzing scientific experiments. Software developers and researchers have developed hundreds of…

软件工程 · 计算机科学 2023-09-15 Khairul Alam , Banani Roy , Alexander Serebrenik

Background: Many published machine learning studies are irreproducible. Issues with methodology and not properly accounting for variation introduced by the algorithm themselves or their implementations are attributed as the main…

机器学习 · 计算机科学 2023-04-17 Odd Erik Gundersen , Kevin Coakley , Christine Kirkpatrick , Yolanda Gil

The high incidence of irreproducible research has led to urgent appeals for transparency and equitable practices in open science. For the scientific disciplines that rely on computationally intensive analyses of large data sets, a granular…

Software is now a vital scientific instrument, providing the tools for data collection and analysis across disciplines from bioinformatics and computational physics, to the humanities. The software used in research is often home-grown and…

软件工程 · 计算机科学 2019-03-15 Mario Rosado de Souza , Robert Haines , Markel Vigo , Caroline Jay

Recent reproducibility case studies have raised concerns showing that much of the deposited research has not been reproducible. One of their conclusions was that the way data repositories store research data and code cannot fully facilitate…

数字图书馆 · 计算机科学 2020-06-18 Ana Trisovic , Philip Durbin , Tania Schlatter , Gustavo Durand , Sonia Barbosa , Danny Brooke , Mercè Crosas

Recent studies have shown that the majority of published computational models in systems biology and physiology are not repeatable or reproducible. There are a variety of reasons for this. One of the most likely reasons is that given how…

其他定量生物学 · 定量生物学 2021-07-13 Herbert M. Sauro

How should software engineering be adapted for Computational Science (CS)? If we understood that, then we could better support software sustainability, verifiability, reproducibility, comprehension, and usability for CS community. For…

软件工程 · 计算机科学 2020-03-13 Huy Tu , Rishabh Agrawal , Tim Menzies

Replicability is absent in games research; a lack of transparency in protocol detail hinders scientific consensus and willingness to publish public datasets, impacting the application of these techniques in video games research. To combat…

人机交互 · 计算机科学 2023-04-07 Emma J. Pretty , Renan Guarese , Haytham M. Fayek , Fabio Zambetta