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相关论文: Granger causal inference on DAGs identifies genomi…

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Directed acyclic graph (DAG) tasks are currently adopted in the real-time domain to model complex applications from the automotive, avionics, and industrial domains that implement their functionalities through chains of intercommunicating…

机器学习 · 计算机科学 2024-01-12 Binqi Sun , Mirco Theile , Ziyuan Qin , Daniele Bernardini , Debayan Roy , Andrea Bastoni , Marco Caccamo

Causal inference aids researchers in discovering cause-and-effect relationships, leading to scientific insights. Accurate causal estimation requires identifying confounding variables to avoid false discoveries. Pearl's causal model uses…

机器学习 · 计算机科学 2025-04-22 Anna Zeng , Michael Cafarella , Batya Kenig , Markos Markakis , Brit Youngmann , Babak Salimi

Integrated Gradients (IG) is a common explainability technique to address the black-box problem of neural networks. Integrated gradients assumes continuous data. Graphs are discrete structures making IG ill-suited to graphs. In this work,…

机器学习 · 计算机科学 2025-09-10 Lachlan Simpson , Kyle Millar , Adriel Cheng , Cheng-Chew Lim , Hong Gunn Chew

Causal discovery is a crucial initial step in establishing causality from empirical data and background knowledge. Numerous algorithms have been developed for this purpose. Among them, the score-matching method has demonstrated superior…

机器学习 · 统计学 2026-04-14 Hao Chen , Kai Yi

Graph data often contain noisy and spurious correlations that mask the true causal relationships, which are essential for enabling graph models to make predictions based on the underlying causal structure of the data. Dependence on spurious…

机器学习 · 计算机科学 2026-02-23 Simi Job , Xiaohui Tao , Taotao Cai , Haoran Xie , Jianming Yong

The investigation of directed acyclic graphs (DAGs) encoding the same Markov property, that is the same conditional independence relations of multivariate observational distributions, has a long tradition; many algorithms exist for model…

统计方法学 · 统计学 2012-09-27 Alain Hauser , Peter Bühlmann

Graphs are expressive abstractions representing more effectively relationships in data and enabling data science tasks. They are also a widely adopted paradigm in causal inference focusing on causal directed acyclic graphs. Causal DAGs…

数据库 · 计算机科学 2024-12-19 Amedeo Pachera , Mattia Palmiotto , Angela Bonifati , Andrea Mauri

Understanding causal relationships in multivariate time series is essential for predicting and controlling dynamic systems in fields like economics, neuroscience, and climate science. However, existing causal discovery methods often assume…

机器学习 · 计算机科学 2025-02-20 Abdellah Rahmani , Pascal Frossard

Kernel-based methods are used in the context of Granger Causality to enable the identification of nonlinear causal relationships between time series variables. In this paper, we show that two state of the art kernel-based Granger Causality…

机器学习 · 计算机科学 2026-01-15 Fiona Murphy , Alessio Benavoli

Understanding mechanistic relationships among genes and their impacts on biological pathways is essential for elucidating disease mechanisms and advancing precision medicine. Despite the availability of extensive molecular interaction and…

分子网络 · 定量生物学 2026-03-24 Fujian Jia , Jiwen Gu , Cheng Lu , Dezhi Zhao , Mengjiang Huang , Yuanzhi Lu , Xin Liu , Kang Liu

The problem of finding an ancestral acyclic directed mixed graph (ADMG) that represents the causal relationships between a set of variables is an important area of research on causal inference. Most existing score-based structure learning…

机器学习 · 计算机科学 2021-10-11 Rui Chen , Sanjeeb Dash , Tian Gao

While most classical approaches to Granger causality detection assume linear dynamics, many interactions in real-world applications, like neuroscience and genomics, are inherently nonlinear. In these cases, using linear models may lead to…

机器学习 · 统计学 2021-03-16 Alex Tank , Ian Covert , Nicholas Foti , Ali Shojaie , Emily Fox

Uncovering causal structures from observational data is crucial for understanding complex systems and making informed decisions. While reinforcement learning (RL) has shown promise in identifying these structures in the form of a directed…

机器学习 · 计算机科学 2026-03-24 Dong Li , Zhengzhang Chen , Xujiang Zhao , Linlin Yu , Zhong Chen , Yi He , Haifeng Chen , Chen Zhao

We establish a new framework for statistical estimation of directed acyclic graphs (DAGs) when data are generated from a linear, possibly non-Gaussian structural equation model. Our framework consists of two parts: (1) inferring the…

机器学习 · 统计学 2013-11-15 Po-Ling Loh , Peter Bühlmann

Directed Acyclic Graphs (DAGs) are a standard tool in causal modeling, but their suitability for capturing the complexity of large-scale multimodal data is questionable. In practice, real-world multimodal datasets are often collected from…

Identification theory for causal effects in causal models associated with hidden variable directed acyclic graphs (DAGs) is well studied. However, the corresponding algorithms are underused due to the complexity of estimating the…

机器学习 · 统计学 2022-10-17 Rohit Bhattacharya , Razieh Nabi , Ilya Shpitser

Graph Neural Networks (GNN) are reshaping our understanding of biomedicine and diseases by revealing the deep connections among genes and cells. As both algorithmic and biomedical technologies have advanced significantly, we're entering a…

Inferring the causal relationships among a set of variables in the form of a directed acyclic graph (DAG) is an important but notoriously challenging problem. Recently, advancements in high-throughput genomic perturbation screens have…

机器学习 · 计算机科学 2025-10-03 Seong Woo Han , Daniel Duy Vo , Brielin C. Brown

Through recognizing causal subgraphs, causal graph learning (CGL) has risen to be a promising approach for improving the generalizability of graph neural networks under out-of-distribution (OOD) scenarios. However, the empirical successes…

机器学习 · 计算机科学 2025-07-02 Yujia Yin , Tianyi Qu , Zihao Wang , Yifan Chen

Estimating the structure of Bayesian networks as directed acyclic graphs (DAGs) from observational data is a fundamental challenge, particularly in causal discovery. Bayesian approaches excel by quantifying uncertainty and addressing…

机器学习 · 计算机科学 2026-02-17 Edwin V. Bonilla , Pantelis Elinas , He Zhao , Maurizio Filippone , Vassili Kitsios , Terry O'Kane
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