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Animal movement exhibits complex behavior which can be influenced by unobserved environmental conditions. We propose a model which allows for a spatially-varying movement rate and spatially-varying drift through a semiparametric potential…

应用统计 · 统计学 2017-02-28 James C. Russell , Ephraim M. Hanks , Murali Haran , David P. Hughes

The Allee effect describes a decline in population fitness at low densities, potentially leading to extinction. In predator-prey systems, an emergent Allee effect can arise due to interactions such as density-dependent maturation rates and…

种群与进化 · 定量生物学 2025-03-25 Carlos Granados , Leon A. Valencia

Ecological systems are complex dynamical systems. Modelling efforts on ecosystems' dynamical stability have revealed that population dynamics, being highly nonlinear, can be governed by complex fluctuations. Indeed, experimental and field…

The hydrodynamical model of the collective behavior of animals consists of the Euler equation with additional non-local forcing terms representing the repulsive and attractive forces among individuals. This paper deals with the system…

偏微分方程分析 · 数学 2021-07-01 Pavel Ludvik , Vaclav Macha

Endangered populations often experience limited growth ability at low densities, a phenomenon described by the Allee effect. In this thesis, we investigate a predator-prey model incorporating the Allee effect within a two-dimensional…

种群与进化 · 定量生物学 2025-12-15 Junhui Hu

We propose a novel problem formulation of continuous-time information propagation on heterogenous networks based on jump stochastic differential equations (SDE). The structure of the network and activation rates between nodes are naturally…

数值分析 · 数学 2018-10-26 Yaohua Zang , Gang Bao , Xiaojing Ye , Hongyuan Zha , Haomin Zhou

Simulation of population dynamics is a central research theme in computational biology, which contributes to understanding the interactions between predators and preys. Conventional mathematical tools of this theme, however, are incapable…

多智能体系统 · 计算机科学 2020-02-11 Jun Yamada , John Shawe-Taylor , Zafeirios Fountas

Differential equations (DEs) are commonly used to describe dynamic systems evolving in one (ordinary differential equations or ODEs) or in more than one dimensions (partial differential equations or PDEs). In real data applications the…

统计方法学 · 统计学 2013-11-25 Gianluca Frasso , Jonathan Jaeger , Philippe Lambert

Spatially extended population dynamics models that incorporate intrinsic noise serve as case studies for the role of fluctuations and correlations in biological systems. Including spatial structure and stochastic noise in predator-prey…

统计力学 · 物理学 2018-01-09 Ulrich Dobramysl , Mauro Mobilia , Michel Pleimling , Uwe C. Täuber

Predicting outcomes and planning interactions with the physical world are long-standing goals for machine learning. A variety of such tasks involves continuous physical systems, which can be described by partial differential equations…

机器学习 · 计算机科学 2020-01-22 Philipp Holl , Vladlen Koltun , Nils Thuerey

Stochastic discriminative EM (sdEM) is an online-EM-type algorithm for discriminative training of probabilistic generative models belonging to the exponential family. In this work, we introduce and justify this algorithm as a stochastic…

机器学习 · 计算机科学 2017-04-05 Andres R. Masegosa

Stochastic differential equations (SDEs) are well suited to modelling noisy and irregularly sampled time series found in finance, physics, and machine learning. Traditional approaches require costly numerical solvers to sample between…

机器学习 · 计算机科学 2025-10-30 Naoki Kiyohara , Edward Johns , Yingzhen Li

Mathematical modelling and numerical simulations of interaction populations are crucial topics in systems biology. The interactions of ecological models may occur among individuals of the same species or individuals of different species.…

定量方法 · 定量生物学 2017-09-04 Sarbaz H. A. Khoshnaw

There are various examples of phenotypic plasticity in ecosystems that serve as the basis for a wide range of inducible defences against predation. These strategies include camouflage, burrowing, mimicry, evasive actions, and even…

种群与进化 · 定量生物学 2025-01-06 Sangeeta Saha , Swadesh Pal , Roderick Melnik

The aim of our study is to describe the dynamics of ant battles, with reference to laboratory experiments, by means of a chemical stochastic model. We focus on ants behavior as an interesting topic in order to predict the ecological…

种群与进化 · 定量生物学 2016-05-09 Alisa Santarlasci , Gianluca Martelloni , Filippo Frizzi , Giacomo Santini , Franco Bagnoli

We analyze predator-prey dynamics in one dimension in which a Brownian predator adopts a chasing strategy that consists in stochastically resetting its current position to locations previously visited by a diffusive prey. We study three…

无序系统与神经网络 · 物理学 2019-12-05 J. Quetzalcoatl Toledo-Marin , Denis Boyer , Francisco J. Sevilla

Stochastic differential equations (SDEs) describe dynamical systems where deterministic flows, governed by a drift function, are superimposed with random fluctuations, dictated by a diffusion function. The accurate estimation (or discovery)…

机器学习 · 计算机科学 2025-10-22 Patrick Seifner , Kostadin Cvejoski , David Berghaus , Cesar Ojeda , Ramses J. Sanchez

Collective motion in animal groups emerges from the interplay between individual variability and social coordination, yet connecting these scales quantitatively has remained a major challenge.Using high-resolution trajectories of schooling…

其他凝聚态物理 · 物理学 2026-01-15 Elena G. de Lamo , M. Carmen Miguel , Romualdo Pastor-Satorras

We investigate existence of stationary solutions to an aggregation/diffusion system of PDEs, modelling a two species predator-prey interaction. In the model this interaction is described by non-local potentials that are mutually…

偏微分方程分析 · 数学 2019-04-11 S. Fagioli , Y. Jaafra

Deriving emergent patterns from models of biological processes is a core concern of mathematical biology. In the context of partial differential equations (PDEs), these emergent patterns sometimes appear as local minimisers of a…

偏微分方程分析 · 数学 2022-10-05 Valeria Giunta , Thomas Hillen , Mark A. Lewis , Jonathan R. Potts