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During the life of animals, epithelial tissues undergo extensive deformations--first to form organs during embryogensis and later to preserve integrity and function in adulthood. To what extent these deformations resemble that of non-living…

软凝聚态物质 · 物理学 2025-04-23 Urska Andrensek , Matej Krajnc

During epithelial wound healing, cell morphology near the healed wound and the healing rate vary strongly among different developmental stages even for a single species like \textit{Drosophila}. We develop deformable particle (DP) model…

生物物理 · 物理学 2024-02-23 Andrew T. Ton , Arthur K. MacKeith , Mark D. Shattuck , Corey S. O'Hern

The homeostasis of epithelial tissue relies on a balance between the self-renewal of stem cell populations, cellular differentiation, and loss. Although this balance needs to be tightly regulated to avoid pathologies, such as tumor growth,…

生物物理 · 物理学 2024-04-10 Johannes C. Krämer , Edouard Hannezo , Gerhard Gompper , Jens Elgeti

We propose a three dimensional mechanical model of embryonic tissue dynamics. Mechanically coupled adherent cells are represented as particles interconnected with elastic beams which can exert non-central forces and torques. Tissue…

生物物理 · 物理学 2015-06-22 Andras Czirok , Dona Greta Isai

Liquid-liquid phase separation has emerged as a fundamental mechanism underlying intracellular organization, with evidence for it being reported in numerous different systems. However, there is a growing concern regarding the lack of…

软凝聚态物质 · 物理学 2022-12-09 Mrityunjay Kothari , Tal Cohen

Human embryonic stem cells (ESC) are undifferentiated and are endowed with the capacities of self renewal and pluripotential differentiation. Adult stem cells renew their own tissue, but whether they can trans-differentiate to other tissues…

A recent study has demonstrated that phase separation in binary liquid mixtures is arrested in the presence of elastic networks and can lead to a nearly uniformly-sized distribution of the dilute-phase droplets. At longer timescales, these…

软凝聚态物质 · 物理学 2020-10-28 Mrityunjay Kothari , Tal Cohen

The shapes of epithelial tissues result from a complex interplay of contractile forces in the cytoskeleta of the cells in the tissue, and adhesion forces between them. A host of discrete, cell-based models describe these forces by assigning…

软凝聚态物质 · 物理学 2019-02-27 Pierra A. Haas , Raymond E. Goldstein

Biological cells embedded in fibrous matrices have been observed to form inter-cellular bands of dense and aligned fibers, through which they mechanically interact over long distances. Such matrix-mediated cellular interactions have been…

The phenomenon of cell sorting/segregation, by which cells organise spatially into clusters of specific cell type or function, is essential for tissue morphogenesis. This self-organization process involves an interplay between mechanical,…

Stem cells are characterized by their ability to self-renew, as well as to differentiate and give rise to new populations of cells. Stem cell divisions are crucial for generative processes that occur during early development, and later in…

应用统计 · 统计学 2025-08-29 Haim Bar , Huyen Nguyen , Joanne Conover

Tissue boundaries pattern embryos, suppress tumours, and provide directional cues. Tissue boundaries are associated with supracellular cables formed by actin and the molecular motor non-muscle myosin II. Actomyosin cables generate tension…

Cellular contractility, migration, and extracellular matrix (ECM) mechanics are critical for a wide range of biological processes including embryonic development, wound healing, tissue morphogenesis, and regeneration. Even though the…

生物物理 · 物理学 2023-10-17 Jaemin Kim , Mahmut Selman Sakar , Nikolaos Bouklas

During embryonic development, regeneration and homeostasis, cells have to physically integrate into their target tissues, where they ultimately execute their function. Despite a significant body of research on how mechanical forces instruct…

In processes such as embryo shaping, wound healing, and malignant cell invasion, epithelial cells transition between dispersed phases, where the cells move independently, and condensed phases, where they aggregate and deform to close gaps,…

软凝聚态物质 · 物理学 2024-09-25 Anshuman Pasupalak , Zeng Wu , Massimo Pica Ciamarra

Numerous biological approaches are available to characterise the mechanisms which govern the formation of human embryonic stem cell (hESC) colonies. To understand how the kinematics of single and pairs of hESCs impact colony formation, we…

定量方法 · 定量生物学 2018-01-08 L. E. Wadkin , L. F. Elliot , I. Neganova , N. G. Parker , V. Chichagova , G. Swan , A. Laude , M. Lako , A. Shukurov

To explain the differentiation of stem cells in terms of dynamical systems theory, models of interacting cells with intracellular protein expression dynamics are analyzed and simulated. Simulations were carried out for all possible protein…

细胞行为 · 定量生物学 2015-06-15 Yusuke Goto , Kunihiko Kaneko

During development, cell fates are determined through a combination of intracellular transcriptional regulations and extracellular signaling. As a result, spatial patterns of different cell types arise. We investigate the decision between…

细胞行为 · 定量生物学 2021-11-03 Simon Schardt , Sabine C. Fischer

Connecting cell behavior to tissue shape and mechanics is a key challenge in the physics of morphogenesis. Cytoskeletal turnover precludes a fixed reference state, and tensions are actively generated independently of strain; so conventional…

软凝聚态物质 · 物理学 2026-05-28 Nikolas H. Claussen , Fridtjof Brauns , Boris I. Shraiman

Many morphogenetic processes involve mechanical rearrangement of epithelial tissues that is driven by precisely regulated cytoskeletal forces and cell adhesion. The mechanical state of the cell and intercellular adhesion are not only the…

细胞行为 · 定量生物学 2015-06-03 Kevin K. Chiou , Lars Hufnagel , Boris I. Shraiman
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