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Event-driven molecular dynamics is a valuable tool in condensed and soft matter physics when particles can be modeled as hard objects or more generally if their interaction potential can be modeled in a stepwise fashion. Hard spheres model…

计算物理 · 物理学 2015-05-19 Cristiano De Michele

Several physical systems in condensed matter have been modeled approximating their constituent particles as hard objects. The hard spheres model has been indeed one of the cornerstones of the computational and theoretical description in…

计算物理 · 物理学 2015-05-13 Cristiano De Michele

We provide a numerical study of the macroscopic model of [3] derived from an agent-based model for a system of particles interacting through a dynamical network of links. Assuming that the network remodelling process is very fast, the…

We present experimental confirmation of dynamic facilitation in monodisperse and bidisperse colloidal suspensions near the glass transition volume fraction. Correlations in particle dynamics are seen to exist not only in space (clusters and…

软凝聚态物质 · 物理学 2014-06-24 Scott V. Franklin , Eric R. Weeks

Diffusion in an evolving environment is studied by continuos-time Monte Carlo simulations. Diffusion is modelled by continuos-time random walkers on a lattice, in a dynamic environment provided by bubbles between two one-dimensional…

软凝聚态物质 · 物理学 2010-11-22 Janne Juntunen , Juha Merikoski

We study diffusion of particles in large-scale simulations of one-dimensional stochastic sandpiles, in both the restricted and unrestricted versions. The results indicate that the diffusion constant scales in the same manner as the activity…

统计力学 · 物理学 2015-05-13 S. D. da Cunha , Ronaldo R. Vidigal , L. R. da Silva , Ronald Dickman

We analyse a one-dimensional model of hard particles, within ensembles of trajectories that are conditioned (or biased) to atypical values of the time-averaged dynamical activity. We analyse two phenomena that are associated with these…

统计力学 · 物理学 2015-11-18 Ian R. Thompson , Robert L. Jack

In this work we study the spreading dynamics of tiny liquid droplets on solid surfaces in the case where the ends of the molecules feel different interactions with respect to the surface. We consider a simple model of dimers and short…

凝聚态物理 · 物理学 2009-10-28 M. Haataja , J. A. Nieminen , T. Ala-Nissila

Understanding the high-pressure phase behavior of carbon dioxide-hydrocarbon mixtures is of considerable interest owing to their wide range of applications. Under certain conditions, these systems are not amenable to direct visual…

We examine the dynamics of hard spheres and discs at high packing fractions in two and three dimensions, modeling the simplest systems exhibiting a glass transition. As it is well known, cooperativity and dynamic heterogeneity arise as…

软凝聚态物质 · 物理学 2007-05-23 Burkhard Doliwa , Andreas Heuer

Low-dimensional periodic arrays of scatterers with a moving point particle are ideal models for studying deterministic diffusion. For such systems the diffusion coefficient is typically an irregular function under variation of a control…

混沌动力学 · 物理学 2009-11-07 R. Klages , N. Korabel

The diffusion of particles trapped in long narrow channels occurs predominantly in one dimension. Here, molecular dynamics simulation is used to study the inertial dynamics of two-dimensional hard disks, confined to long, narrow,…

软凝聚态物质 · 物理学 2020-02-05 Mahdi Zarif , Richard K. Bowles

Molecular dynamics simulations of interacting soft disks confined in a heterogeneous quenched matrix of soft obstacles show dynamics which is fundamentally different from that of hard disks. The interactions between the disks can enhance…

软凝聚态物质 · 物理学 2018-02-21 Simon Kaspar Schnyder , Jürgen Horbach

Diffusive molecular dynamics is a novel model for materials with atomistic resolution that can reach diffusive time scales. The main ideas of diffusive molecular dynamics are to first minimize an approximate variational Gaussian free energy…

数值分析 · 数学 2015-06-09 Gideon Simpson , Mitchell Luskin , David J. Srolovitz

Slow dynamics in a fluid are studied in one of the most basic systems possible: polydisperse hard spheres. Monodisperse hard spheres cannot be studied as the slow down in dynamics as the density is increased is preempted by crystallisation.…

软凝聚态物质 · 物理学 2009-10-31 Richard P. Sear

Translational diffusion coefficients are routinely estimated from molecular dynamics simulations. Linear fits to mean squared displacement (MSD) curves have become the de facto standard, from simple liquids to complex biomacromolecules.…

计算物理 · 物理学 2020-11-20 Jakob Tómas Bullerjahn , Sören von Bülow , Gerhard Hummer

Explicit simulations of fluid mixtures of highly size-dispersed particles are constrained by numerical challenges associated with identifying pair-interaction neighbors. Recent algorithmic developments have ameliorated these difficulties to…

软凝聚态物质 · 物理学 2022-12-07 Joseph M. Monti , Gary S. Grest

Diffusions are a successful technique to sample from high-dimensional distributions. The target distribution can be either explicitly given or learnt from a collection of samples. They implement a diffusion process whose endpoint is a…

机器学习 · 计算机科学 2025-09-03 Andrea Montanari

We use computer simulations to explore the manner in which the particle displacements on intermediate time scales in supercooled fluids correlate to their dynamic structural environment. The fluid we study, a binary mixture of hard spheres,…

软凝聚态物质 · 物理学 2010-05-11 William P. Krekelberg , Venkat Ganesan , Thomas M. Truskett

Nonequilibrium statistical mechanics exhibit a variety of complex phenomena far from equilibrium. It inherits challenges of equilibrium, including accurately describing the joint distribution of a large number of configurations, and also…

统计力学 · 物理学 2024-02-08 Ying Tang , Jing Liu , Jiang Zhang , Pan Zhang
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