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The human {\it ether-a-go-go} (hERG) potassium channel (K$_\text{v}11.1$) plays a critical role in mediating cardiac action potential. The blockade of this ion channel can potentially lead fatal disorder and/or long QT syndrome. Many drugs…

生物大分子 · 定量生物学 2022-11-03 Hongsong Feng , Guowei Wei

The link between in vitro hERG ion channel inhibition and subsequent in vivo QT interval prolongation, a critical risk factor for the development of arrythmias such as Torsade de Pointes, is so well established that in vitro hERG activity…

机器学习 · 计算机科学 2024-08-08 Gregory W. Kyro , Matthew T. Martin , Eric D. Watt , Victor S. Batista

In silico prediction of cardiotoxicity with high sensitivity and specificity for potential drug molecules can be of immense value. Hence, building machine learning classification models, based on some features extracted from the molecular…

定量方法 · 定量生物学 2021-06-09 Aditya Sarkar , Arnav Bhavsar

Blockage of some ion channels and in particular, the hERG cardiac potassium channel delays cardiac repolarization and can induce arrhythmia. In some cases it leads to a potentially life-threatening arrhythmia known as Torsade de Pointes…

生物大分子 · 定量生物学 2017-10-05 Mohsen Sharifi , Dan Buzatu , Stephen Harris , Jon Wilkes

Pain is a significant global health issue, and the current treatment options for pain management have limitations in terms of effectiveness, side effects, and potential for addiction. There is a pressing need for improved pain treatments…

生物大分子 · 定量生物学 2023-07-13 Long Chen , Jian Jiang , Bozheng Dou , Hongsong Feng , Jie Liu , Yueying Zhu , Bengong Zhang , Tianshou Zhou , Guo-Wei Wei

Toxicity prediction of chemical compounds is a grand challenge. Lately, it achieved significant progress in accuracy but using a huge set of features, implementing a complex blackbox technique such as a deep neural network, and exploiting…

机器学习 · 计算机科学 2019-01-29 Abdul Karim , Avinash Mishra , M A Hakim Newton , Abdul Sattar

Timely assessment of compound toxicity is one of the biggest challenges facing the pharmaceutical industry today. A significant proportion of compounds identified as potential leads are ultimately discarded due to the toxicity they induce.…

机器学习 · 统计学 2018-06-13 Mikhail Zaslavskiy , Simon Jégou , Eric W. Tramel , Gilles Wainrib

Combination therapy has shown to improve therapeutic efficacy while reducing side effects. Importantly, it has become an indispensable strategy to overcome resistance in antibiotics, anti-microbials, and anti-cancer drugs. Facing enormous…

分子网络 · 定量生物学 2020-04-24 Mostafa Karimi , Arman Hasanzadeh , Yang shen

The drug discovery and development process is a long and expensive one, costing over 1 billion USD on average per drug and taking 10-15 years. To reduce the high levels of attrition throughout the process, there has been a growing interest…

定量方法 · 定量生物学 2022-08-22 Cheng Ye , Rowan Swiers , Stephen Bonner , Ian Barrett

We present an ensemble machine-learning approach for composition-based, structure-agnostic screening of candidate superconductors among ternary hydrides under high pressure. Hydrogen-rich hydrides are known to exhibit high superconducting…

超导电性 · 物理学 2026-05-18 Kazuaki Tokuyama , Souta Miyamoto , Taichi Masuda , Katsuaki Tanabe

Heart disease remains a leading cause of mortality and morbidity worldwide, necessitating the development of accurate and reliable predictive models to facilitate early detection and intervention. While state of the art work has focused on…

机器学习 · 计算机科学 2025-05-23 Mahade Hasan , Farhana Yasmin , Xue Yu

Background: Virtual Screening (VS) has become an essential tool in drug discovery, enabling the rapid and cost-effective identification of potential bioactive molecules. Among recent advancements, Graph Neural Networks (GNNs) have gained…

定量方法 · 定量生物学 2025-10-27 Salvatore Contino , Paolo Sortino , Maria Rita Gulotta , Ugo Perricone , Roberto Pirrone

Investigation on the electrocardiogram (ECG) signals is an essential way to diagnose heart disease since the ECG process is noninvasive and easy to use. This work presents a supraventricular arrhythmia prediction model consisting of a few…

信号处理 · 电气工程与系统科学 2021-12-28 Pampa Howladar , Manodipan Sahoo

Room temperature superconductivity remains elusive, and hydrogen-base compounds despite remarkable transition temperatures(Tc) typically require extreme pressures that hinder application. To accelerate discovery under moderate pressures, an…

超导电性 · 物理学 2025-11-17 Jiawei Chen , Junhao Peng , Yanwei Liang , Renhai Wang , Huafeng Dong , Wei Zhang

Adverse drug reactions (ADRs) are a major barrier to safe and effective pharmacotherapy and increasingly reflect higher order interactions between drugs, genetic background, and clinical phenotypes. Existing graph based approaches usually…

定量方法 · 定量生物学 2025-12-02 Ze Cai , Haotian Tang , Shuai Gao , Binbin Zhou , Junhan Zhao , Jun Wen

Prediction of toxicity levels of chemical compounds is an important issue in Quantitative Structure-Activity Relationship (QSAR) modeling. Although toxicity prediction has achieved significant progress in recent times through deep learning,…

机器学习 · 计算机科学 2019-07-22 Abdul Karim , Jaspreet Singh , Avinash Mishra , Abdollah Dehzangi , M. A. Hakim Newton , Abdul Sattar

Cardiovascular disease (CVD) remains the foremost cause of mortality worldwide, underscoring the urgent need for intelligent and data-driven diagnostic tools. Traditional predictive models often struggle to generalize across heterogeneous…

人工智能 · 计算机科学 2026-01-27 Rajan Das Gupta , Xiaobin Wu , Xun Liu , Jiaqi He

Toxicity detection of text has been a popular NLP task in the recent years. In SemEval-2021 Task-5 Toxic Spans Detection, the focus is on detecting toxic spans within passages. Most state-of-the-art span detection approaches employ various…

计算与语言 · 计算机科学 2021-08-16 Gunjan Chhablani , Abheesht Sharma , Harshit Pandey , Yash Bhartia , Shan Suthaharan

Cardiovascular disease (CVD) remains a critical global health concern, demanding reliable and interpretable predictive models for early risk assessment. This study presents a large-scale analysis using the Heart Disease Health Indicators…

机器学习 · 计算机科学 2025-11-05 Md Abrar Hasnat , Md Jobayer , Md. Mehedi Hasan Shawon , Md. Golam Rabiul Alam

Endocrine-disrupting chemicals (EDCs) threaten human health, ecosystems, and biodiversity by interfering with hormonal signaling pathways conserved across vertebrates. Traditional in vivo assays are costly and time-consuming, limiting their…

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