相关论文: Measuring Quality of DNA Sequence Data via Degrada…

Declarative data quality has been an active research topic. The fundamental principle behind a declarative approach to data quality is the use of declarative statements to realize data quality primitives on top of any relational data…

DNA is subject to large deformations in a wide range of biological processes. Two key examples illustrate how such deformations influence the readout of the genetic information: the sequestering of eukaryotic genes by nucleosomes, and DNA…

Genomic data I used in many fields but, it has become known that most of the platforms used in the sequencing process produce significant errors. This means that the analysis and inferences generated from these data may have some errors…

The influence of decoherence and bonding on the linear conductance of single double-stranded DNA molecules is examined by fitting a phenomenological statistical model developed recently (EPJB {\bf 68}, 237 (2009)) to experimental results.…

Error-correcting codes over sets, with applications to DNA storage, are studied. The DNA-storage channel receives a set of sequences, and produces a corrupted version of the set, including sequence loss, symbol substitution, symbol…

Biometric technology has been increasingly deployed in the past decade, offering greater security and convenience than traditional methods of personal recognition. Although biometric signals' quality heavily affects a biometric system's…

Data taking values on discrete sample spaces are the embodiment of modern biological research. "Omics" experiments produce millions of symbolic outcomes in the form of reads (i.e., DNA sequences of a few dozens to a few hundred…

The development of data-driven heart sound classification models has been an active area of research in recent years. To develop such data-driven models in the first place, heart sound signals need to be captured using a signal acquisition…

Genomic datasets contain the effects of various unobserved biological variables in addition to the variable of primary interest. These latent variables often affect a large number of features (e.g., genes) and thus give rise to dense latent…

Over the past several years, DNA sequencing has emerged as one of the driving forces in life-sciences, paving the way for affordable and accurate whole genome sequencing. As genomes represent the entirety of an organism's hereditary…

In an era where data underpins decision-making across science, politics, and economics, ensuring high data quality is of paramount importance. Conventional computing algorithms for enhancing data quality, including anomaly detection, demand…

Data quality problems are a large threat in data science. In this paper, we propose a data-cleaning autoencoder capable of near-automatic data quality improvement. It learns the structure and dependencies in the data and uses it as evidence…

This report discusses the issues of data quality in biobanks. It presents the state-of-the-art in data quality: the definition of data quality, the dimensions of data quality, and the quality management system for achieving or describing…

In materials sciences, a large amount of research data is generated through a broad spectrum of different experiments. As of today, experimental research data including meta-data in materials science is often stored decentralized by the…

A pervasive problem in Data Science is that the knowledge generated by possibly expensive analytics processes is subject to decay over time, as the data used to compute it drifts, the algorithms used in the processes are improved, and the…

In this paper we describe a new technique for the comparison of populations of DNA strands. Comparison is vital to the study of ecological systems, at both the micro and macro scales. Existing methods make use of DNA sequencing and cloning,…

The rapid advance of DNA sequencing technologies has yielded databases of thousands of genomes. To search and index these databases effectively, it is important that we take advantage of the similarity between those genomes. Several authors…

A method for encoding information in DNA sequences is described. The method is based on the precision-resolution framework, and is aimed to work in conjunction with a recently suggested terminator-free template independent DNA synthesis…

Is the quality of existing code correlated with the quality of subsequent changes? According to the (controversial) broken windows theory, which inspired this study, disorder sets descriptive norms and signals behavior that further…

We introduce a novel method to analyse complete genomes and recognise some distinctive features by means of an adaptive compression algorithm, which is not DNA-oriented. We study the Information Content as a function of the number of…