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Off-the-shelf biomedical embeddings obtained from the recently released various pre-trained language models (such as BERT, XLNET) have demonstrated state-of-the-art results (in terms of accuracy) for the various natural language…

计算与语言 · 计算机科学 2020-12-22 Ishani Mondal

Text mining the relations between chemicals and proteins is an increasingly important task. The CHEMPROT track at BioCreative VI aims to promote the development and evaluation of systems that can automatically detect the chemical-protein…

计算与语言 · 计算机科学 2018-02-06 Yifan Peng , Anthony Rios , Ramakanth Kavuluru , Zhiyong Lu

Relation prediction in knowledge graphs is dominated by embedding based methods which mainly focus on the transductive setting. Unfortunately, they are not able to handle inductive learning where unseen entities and relations are present…

计算与语言 · 计算机科学 2021-03-15 Hanwen Zha , Zhiyu Chen , Xifeng Yan

Existing research studies on cross-sentence relation extraction in long-form multi-party conversations aim to improve relation extraction without considering the explainability of such methods. This work addresses that gap by focusing on…

计算与语言 · 计算机科学 2022-10-20 Alon Albalak , Varun Embar , Yi-Lin Tuan , Lise Getoor , William Yang Wang

Biological relation networks contain rich information for understanding the biological mechanisms behind the relationship of entities such as genes, proteins, diseases, and chemicals. The vast growth of biomedical literature poses…

计算与语言 · 计算机科学 2025-01-27 Po-Ting Lai , Chih-Hsuan Wei , Shubo Tian , Robert Leaman , Zhiyong Lu

We introduce SpERT, an attention model for span-based joint entity and relation extraction. Our key contribution is a light-weight reasoning on BERT embeddings, which features entity recognition and filtering, as well as relation…

计算与语言 · 计算机科学 2021-06-30 Markus Eberts , Adrian Ulges

Adding linguistic information (syntax or semantics) to neural machine translation (NMT) has mostly focused on using point estimates from pre-trained models. Directly using the capacity of massive pre-trained contextual word embedding models…

计算与语言 · 计算机科学 2021-04-08 Hassan S. Shavarani , Anoop Sarkar

In this paper we address the challenge of extracting scientific references from patents. We approach the problem as a sequence labelling task and investigate the merits of BERT models to the extraction of these long sequences. References in…

信息检索 · 计算机科学 2021-03-11 Ken Voskuil , Suzan Verberne

Scientific literature contains a considerable amount of information that provides an excellent opportunity for developing text mining methods to extract biomedical relationships. An important type of information is the relationship between…

计算与语言 · 计算机科学 2023-08-08 Mohammad Dehghani , Behrouz Bokharaeian , Zahra Yazdanparast

Recent studies on domain-specific BERT models show that effectiveness on downstream tasks can be improved when models are pretrained on in-domain data. Often, the pretraining data used in these models are selected based on their subject…

计算与语言 · 计算机科学 2020-10-06 Xiang Dai , Sarvnaz Karimi , Ben Hachey , Cecile Paris

The goal of dialogue relation extraction (DRE) is to identify the relation between two entities in a given dialogue. During conversations, speakers may expose their relations to certain entities by explicit or implicit clues, such evidences…

计算与语言 · 计算机科学 2022-07-26 Po-Wei Lin , Shang-Yu Su , Yun-Nung Chen

Current language models are usually trained using a self-supervised scheme, where the main focus is learning representations at the word or sentence level. However, there has been limited progress in generating useful discourse-level…

计算与语言 · 计算机科学 2021-09-13 Vladimir Araujo , Andrés Villa , Marcelo Mendoza , Marie-Francine Moens , Alvaro Soto

Relation Extraction (RE) is one of the fundamental tasks in Information Extraction and Natural Language Processing. Dependency trees have been shown to be a very useful source of information for this task. The current deep learning models…

计算与语言 · 计算机科学 2019-07-09 Amir Pouran Ben Veyseh , Thien Huu Nguyen , Dejing Dou

Relation extraction is a fundamental problem in natural language processing. Most existing models are defined for relation extraction in the general domain. However, their performance on specific domains (e.g., biomedicine) is yet unclear.…

计算与语言 · 计算机科学 2021-12-14 Yongkang Li

Supervised models trained to predict properties from representations have been achieving high accuracy on a variety of tasks. For instance, the BERT family seems to work exceptionally well on the downstream task from NER tagging to the…

计算与语言 · 计算机科学 2020-12-22 Tejas Vaidhya , Ayush Kaushal

Relation classification is an important NLP task to extract relations between entities. The state-of-the-art methods for relation classification are primarily based on Convolutional or Recurrent Neural Networks. Recently, the pre-trained…

计算与语言 · 计算机科学 2019-05-22 Shanchan Wu , Yifan He

While large language models like BERT demonstrate strong empirical performance on semantic tasks, whether this reflects true conceptual competence or surface-level statistical association remains unclear. I investigate whether BERT encodes…

计算与语言 · 计算机科学 2025-06-16 Cole Gawin

To achieve deep natural language understanding, syntactic constituent parsing plays a crucial role and is widely required by many artificial intelligence systems for processing both text and speech. A recent approach involves using standard…

计算与语言 · 计算机科学 2026-05-14 Daniel Fernández-González , Cristina Outeiriño Cid

Computational chemistry develops fast in recent years due to the rapid growth and breakthroughs in AI. Thanks for the progress in natural language processing, researchers can extract more fine-grained knowledge in publications to stimulate…

计算与语言 · 计算机科学 2019-05-15 Na Pang , Li Qian , Weimin Lyu , Jin-Dong Yang

Relation extraction that is the task of predicting semantic relation type between entities in a sentence or document is an important task in natural language processing. Although there are many researches and datasets for English, Persian…

计算与语言 · 计算机科学 2022-03-30 Moein Salimi Sartakhti , Romina Etezadi , Mehrnoush Shamsfard