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We apply a Transformer architecture, specifically BERT, to learn flexible and high quality molecular representations for drug discovery problems. We study the impact of using different combinations of self-supervised tasks for pre-training,…

机器学习 · 计算机科学 2020-11-30 Benedek Fabian , Thomas Edlich , Héléna Gaspar , Marwin Segler , Joshua Meyers , Marco Fiscato , Mohamed Ahmed

The recent advancement of pre-trained Transformer models has propelled the development of effective text mining models across various biomedical tasks. However, these models are primarily learned on the textual data and often lack the…

计算与语言 · 计算机科学 2021-07-02 Sriram Pingali , Shweta Yadav , Pratik Dutta , Sriparna Saha

Fine-tuned Bidirectional Encoder Representations from Transformers (BERT)-based sequence classification models have proven to be effective for detecting Alzheimer's Disease (AD) from transcripts of human speech. However, previous research…

计算与语言 · 计算机科学 2020-11-13 Aparna Balagopalan , Jekaterina Novikova

Modelling relations between multiple entities has attracted increasing attention recently, and a new dataset called DocRED has been collected in order to accelerate the research on the document-level relation extraction. Current baselines…

计算与语言 · 计算机科学 2019-09-27 Hong Wang , Christfried Focke , Rob Sylvester , Nilesh Mishra , William Wang

The development of deep neural networks has improved representation learning in various domains, including textual, graph structural, and relational triple representations. This development opened the door to new relation extraction beyond…

计算与语言 · 计算机科学 2022-12-22 Masaki Asada

Newly-introduced deep learning architectures, namely BERT, XLNet, RoBERTa and ALBERT, have been proved to be robust on several NLP tasks. However, the datasets trained on these architectures are fixed in terms of size and generalizability.…

计算与语言 · 计算机科学 2020-09-29 Jean-Philippe Corbeil , Hadi Abdi Ghadivel

Relation extraction is an important but challenging task that aims to extract all hidden relational facts from the text. With the development of deep language models, relation extraction methods have achieved good performance on various…

计算与语言 · 计算机科学 2022-08-17 Sheng Zhang , Patrick Ng , Zhiguo Wang , Bing Xiang

Recently BERT has been adopted for document encoding in state-of-the-art text summarization models. However, sentence-based extractive models often result in redundant or uninformative phrases in the extracted summaries. Also, long-range…

计算与语言 · 计算机科学 2020-04-28 Jiacheng Xu , Zhe Gan , Yu Cheng , Jingjing Liu

Learning representations that accurately model semantics is an important goal of natural language processing research. Many semantic phenomena depend on syntactic structure. Recent work examines the extent to which state-of-the-art models…

计算与语言 · 计算机科学 2019-08-28 Geoff Bacon , Terry Regier

A considerable number of texts encountered daily are somehow connected with each other. For example, Wikipedia articles refer to other articles via hyperlinks, scientific papers relate to others via citations or (co)authors, while tweets…

计算与语言 · 计算机科学 2025-08-08 Albert Roethel , Maria Ganzha , Anna Wróblewska

Twitter is a well-known microblogging social site where users express their views and opinions in real-time. As a result, tweets tend to contain valuable information. With the advancements of deep learning in the domain of natural language…

计算与语言 · 计算机科学 2020-10-22 Mohiuddin Md Abdul Qudar , Vijay Mago

We present a novel framework to deal with relation extraction tasks in cases where there is complete lack of supervision, either in the form of gold annotations, or relations from a knowledge base. Our approach leverages syntactic parsing…

机器学习 · 计算机科学 2019-11-04 Yannis Papanikolaou , Ian Roberts , Andrea Pierleoni

This study aims at improving the performance of scoring student responses in science education automatically. BERT-based language models have shown significant superiority over traditional NLP models in various language-related tasks.…

人工智能 · 计算机科学 2023-11-21 Zhengliang Liu , Xinyu He , Lei Liu , Tianming Liu , Xiaoming Zhai

Over the last five years, research on Relation Extraction (RE) witnessed extensive progress with many new dataset releases. At the same time, setup clarity has decreased, contributing to increased difficulty of reliable empirical evaluation…

计算与语言 · 计算机科学 2022-04-29 Elisa Bassignana , Barbara Plank

State-of-the-art methods for relation extraction consider the sentential context by modeling the entire sentence. However, syntactic indicators, certain phrases or words like prepositions that are more informative than other words and may…

计算与语言 · 计算机科学 2019-12-05 Qiongxing Tao , Xiangfeng Luo , Hao Wang

Medication Extraction and Mining play an important role in healthcare NLP research due to its practical applications in hospital settings, such as their mapping into standard clinical knowledge bases (SNOMED-CT, BNF, etc.). In this work, we…

计算与语言 · 计算机科学 2024-12-31 Pablo Romero , Lifeng Han , Goran Nenadic

We study the problem of incorporating prior knowledge into a deep Transformer-based model,i.e.,Bidirectional Encoder Representations from Transformers (BERT), to enhance its performance on semantic textual matching tasks. By probing and…

计算与语言 · 计算机科学 2021-02-23 Tingyu Xia , Yue Wang , Yuan Tian , Yi Chang

Recent research has shown that mixed-initiative conversational search, based on the interaction between users and computers to clarify and improve a query, provides enormous advantages. Nonetheless, incorporating additional information…

计算与语言 · 计算机科学 2021-09-23 Oleg Borisov , Mohammad Aliannejadi , Fabio Crestani

Extracting relationships and interactions between different biological entities is still an extremely challenging problem but has not received much attention as much as extraction in other generic domains. In addition to the lack of…

计算与语言 · 计算机科学 2020-06-02 Abhinav Bhatt , Kaustubh D. Dhole

Pre-training a transformer-based model for the language modeling task in a large dataset and then fine-tuning it for downstream tasks has been found very useful in recent years. One major advantage of such pre-trained language models is…

计算与语言 · 计算机科学 2020-11-17 Md Tahmid Rahman Laskar , Enamul Hoque , Jimmy Xiangji Huang